Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002873 |
Symbol | |
ID | 8556601 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1402122 |
End bp | 1406486 |
Gene Length | 4365 bp |
Protein Length | 1454 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405964 |
Product | AAA ATPase |
Protein accession | YP_003285500 |
Protein GI | 262393646 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3170] Tfp pilus assembly protein FimV |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR03504] FimV C-terminal domain [TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCAAA ATTATAAGCG TTTGTTAGCA GCCCTTGTGT TGATGAGCGC GACTCAGACA TCATCAGTGG TTCAAGCCGA AGGAATTCGT CTTGTTGGAC CGTCTGGTGA AGTGCAATCA TCTCCGAGCT ATGCTGAAGA TATTGAGCGA GCATTACCTG CTCCTCCTGC AAACACTCAG CCGTCACGTT TCTTTGGTCC GACTGGTGAA AATCAAACAC TATGGTCGAT CGCTTCAGAA TTACGACCTT CACGCGGTGT TACCGTTCAA CAAACGCTTC TTGCCATTTA TCGAATTAAC CCTCAAGCGT TTGAGAACCA AAACATTCAT GAGTTGATCC CAGGGAGTCG ACTACGAGTA CCGTCTCTAG AGCAAGTGCA AAGCGCGACT ACAGAGCAAG CTGTTGCGAT TATGAAGGCG CACGAGGCTA AGTTAAAACA GCCGAAGCCG ACAAATAGAG CCACGCCAGC GCAACGCGTC ACCGAGCAAC CAAAGCCACA AATAAAAGTA GAACCCAAGC CTGTTGCTCC TAAACCAGAA ACCACTGTAG CTGCGGAACC AAAACCGGTT CAAAAAACAA TACCAGTTAT TCCTGCGCCA CCTGTGAACA CCTCTCCGCA GGGTGAAAAG CAGGTCAGTG CGTTAAAAGA CAAACTTCAA GGCTCACAAA GTGAATTAGA GTCATTGGAA GAGAAGAACC ATCGTCTTCG CTTAATGTTG TCAGAAGTGC AAAGCGAAGT TGAAACCTTG AAAAATGAGC TGAATGACGA AGAACGCATT CGCTCGGAAG TCGAGAAACT GCTTGCTGAA GAGCGCCAGC GCCTTGCTGA GCAACAACGC ATGCAGCCAA GTACGATTGA CAAGATTTTG TCTAATGGTT GGCTTGTCGG CTTAGCGGCG CTTATTCCAG GTGCATTGCT GGCACTGTTG GTTGTGATGT TGCTTGGTCG CCGTTCTAAA AACAAAGAGG AAGAGTCTGC TGAGCAATCG CCGCAGGAAA CCGATCCATT AGCTGCGCCA ATTGGTTTAG CGGCGACGGA CGAGCTGGAT GAAGAACTCA CACTTGATGA TGAGTTGTTC GCAGATGAAG ATATTAATAC TCAGGCTACA CAAGAAGAGA AGCCAGATTT AGAAGAAGAC GTCTTTGCCA ACCTTGACGA TGAAGAACTG GATTTCAACC TAGAAGGGGA CGATGACCCA TTTGCGGGTA TCGGTGATGA CGGCGACCTA GATGTTGGTC TGGATGAGTT TGAGTCATCG AACAATGGTA TCCAAGTTAA CGGCGAAGAA AAAGCGCTTG GTTTAGAAGA GATGGAGCGA GCCTTAGATG AGGTTGCTCC AGAACTAGAA GTGCTCGATG ACGATGAGGC TGGCTTCGAT CTTTCAGATG ATACGAACGA GAAAGCAGAC TCGCTTTCAG ACGACGCATT TGCGGAACTA CTTGCAGCAG ATGAGCCGTC AGAAGAGTTA CCAAGTGACA CTGTCGATCA GGATATGCTT GATGACTTGT TTGCGGAACT TGGCAATGAC GACTTCGACC TAGATACCGA TGAACCTGAA CTAAAACAGC CCGTATCGGA TGATGATTTC AGCGCAGGAG AGGCATCTGA TGACGATATC GATAAGCTAT TAGCTCAATA CGAGCAGCCT GTTACTGAGT CGACAGAAGT TGAAGGTGAC GTCAGCGAAG ACGCCGTTCT AGATGAAAAC AGTACGGACT TACTCGATGA ACTGATCGAT TTTGACGAAG ATGAAACAGA CGACGAGTTT GACCCACTGA ATGAGCTAGA AGCACTCTCT GGTTTTGAAG GTGATGACTC GATTGAAGAG TTAGATGCAG ATAGCACAGA TTTACTGGAT GAACTCATTG ATGACGTCAC ATCCGAACTG GATGAAGAGA CAGGAACTGA GACAGAGTTA GACCCGTTTG ATGATCTGAT TCGAGAGGAC GAAAGCCCTG CACAGAATAA ATCGGAAGAG GAAGAGTTAC TCGCTTCACT TGGTTTTGGC GAACCAGACG GCGAAGAAAA GCCATCTTCA ATAGCTGAGT CAGAGCCAAC CCATGAAGAG CCGGAAATTG AGTCTGGTTT GGACATCGAT GCTTTATTAA GTGACAGTCA ACCAGATCTG CAACAAACAG CGCCAGAGCA ACCATTAACC GAGCCAGAAA CTGCTTCAGA GCCATTTAGC AGCGATGAGT TTCTTGGTGA TTTAGAGGAC CTCTCACCAG AGAACGATCC TTTAATGAGC GAGCTAGACG ACTTGTTTGA GTCAGACAGT GAAGAGCTTC AGCCTACAGA GCAAGAAAAA GCGGACTTTT CTGCTGAACT GGATGCACTA TTTGATACTG AAGATGATTT AACGCAACAA CAAGTTGAAG AGCCGCAAGC TGAGATAGAG GAATCTTCGC CACAACAAGA AGAGGATGCC AATTCTAAGT CAACGCAAGA TGCATCAGTA GAGCCTGATG CTAAAGTGCC GCCTCAAGTT GATACAGAAG AAGACGCCCC AGCGTTCACT CCGACACCAA ATACAGTAGA AAATGAATTT GGTGTTCCAC AAGAAGAAGA TTGGCTACTG GATGAGCCTG AACTAGAAAG TGAAACTCAA CCAGAACAAG AACAAAACTC GGGTAACAAA AGTGAGCCAG AAAGTTCAGA ACTAGCATCA GAAACTGATT CGGCCACCAA TGCAGAAGAA GAGTTCGATT TTGATGAACT CGATCTACCA GAGTTCAGTG AAGAAGACGC ACTGGCGTCC ATGGCGGACG AACCTGCGTT TGATGAACCA GAGCCTGTCG AGCCTGAGCG CTCTGAAGCT GATTCGGCCA CTGAAGCAGA AGATGAATTC AATTTTGATG AACTCGATCT ACCAGAGTTT AGCGAAGAGG ACGCATTGGC GTCTATGGCG GGCGAACCTG CGTTAGATGA CCCAGAATCT ATCGAGCCTG AGCGCTCTGA AGCTGAGTCG GCGACTGAAG CAGAAGAAGA GTTCGATTTC GATGAACTCG AACTGCCAGA GTTTAGTGAA GAGGATGCAT TGGCGTCTAT GGCGGGCGAA CCTGCGTTAG ATGACCCAGA TCGCTCTGAA GCTGAGTCGG CGACTGAAGC AGAAGAAGAG TTCGATTTCG ATGAACTCGA ACTGCTAGAG TTTAGTGAAG AGGATGCATT GGCGTCCATG GCAGGCGAAC CTACGTTAGA TGAACCAGAA TCTATCGAAC CTGAGCGCTC TGAAGCTGAG TCGGCGACTG AAGCAGAAGA AGAGTTCGAT TTCGACGAAC TCGAACTGCC AGAGTTCAGC GAAGAGGACG CATTGGCGTC CATGGCAGGC GAACCTACGT TAGATGAACC AGAATCTATC GAGCCTGAGC GCTCTGAAGC TGAGTCGGCG ACTGAAGCAG AAGAAGAGTT CGATTTCGAT GAACTCGAAC TGCCAGAATT CAGTGAAGAA GACGCCTTGG CATCTATGGA AGAAGAGCCA GAATTACCGA GTTCTGAAAC CGCAGATATA GAACCAATCT CCGGTGAGGA TGAAGAGCTA AGTTTTGACG ACCAAGACCT TCCTGAGTTC AATGAGGAAG ATGTTCTCGC ATCAATGAAT GAGAGTGCGC CAGAGACTCC TAATGTTGAA GCTGAGACAT CGAGACCAAC TCTTCAAGCC GATAACGATC ATGATGCTTT GTTTGAAGTT TTTGCGCAGC AAAACGGTTT TGATACTGAA CCAGAAGTGC AGCCAACGGC GACAGAGGGT GAGCCGCTAA GTGACTTAGA TGATGAATCT TCAATGGCTA ACCTTCTTGC TGAAGACGCA AGTTCAGAGG TATTTGAAGG TCAGTTAGAC AGTGACACCA TCGCAAGCGC AGGTATGGAT TTTGAAACCA TGCTTGATGT TGGAGATGAT TGGGATGGCT TTAAACCAGC TGCCGATAGC GTAAGTTCTA CGGAAGATGT GCCTGAGGAC CAGCGTGATG TTTGGAATTC GAGTGACGCA CTAAGTCAGC CAGAGATCGC GCAAGAAAAC TGGGCAGAGC AAAGCAACTT GGATGACTTC GACCCGAAGA AAAATCAATT TATGACGATT GATGAATTGA TGGCTCAGGT CGATAAAGAA GGTGGTGAGT TCGAAGAGGA AGATCTGAAG CTTGATGTCG GATTGAACGA GTTTCCAGAT GTTATCGGTG AGATCGGCGA TGTTGACGTA GATAGCAACG CTGAAGCTGC TGGAAAACTG GACCTTGCTA AAATCTATCT CGAGATGAAC GATTCTCAAG GGGCGATAAA ATTACTAGAA GAGGCGATTG TTTACGGTGA AGATGATATT CGCCGCGAAG CAAAGAGCTT GATTGATGCC ATTAATGGCC GATAA
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Protein sequence | MRQNYKRLLA ALVLMSATQT SSVVQAEGIR LVGPSGEVQS SPSYAEDIER ALPAPPANTQ PSRFFGPTGE NQTLWSIASE LRPSRGVTVQ QTLLAIYRIN PQAFENQNIH ELIPGSRLRV PSLEQVQSAT TEQAVAIMKA HEAKLKQPKP TNRATPAQRV TEQPKPQIKV EPKPVAPKPE TTVAAEPKPV QKTIPVIPAP PVNTSPQGEK QVSALKDKLQ GSQSELESLE EKNHRLRLML SEVQSEVETL KNELNDEERI RSEVEKLLAE ERQRLAEQQR MQPSTIDKIL SNGWLVGLAA LIPGALLALL VVMLLGRRSK NKEEESAEQS PQETDPLAAP IGLAATDELD EELTLDDELF ADEDINTQAT QEEKPDLEED VFANLDDEEL DFNLEGDDDP FAGIGDDGDL DVGLDEFESS NNGIQVNGEE KALGLEEMER ALDEVAPELE VLDDDEAGFD LSDDTNEKAD SLSDDAFAEL LAADEPSEEL PSDTVDQDML DDLFAELGND DFDLDTDEPE LKQPVSDDDF SAGEASDDDI DKLLAQYEQP VTESTEVEGD VSEDAVLDEN STDLLDELID FDEDETDDEF DPLNELEALS GFEGDDSIEE LDADSTDLLD ELIDDVTSEL DEETGTETEL DPFDDLIRED ESPAQNKSEE EELLASLGFG EPDGEEKPSS IAESEPTHEE PEIESGLDID ALLSDSQPDL QQTAPEQPLT EPETASEPFS SDEFLGDLED LSPENDPLMS ELDDLFESDS EELQPTEQEK ADFSAELDAL FDTEDDLTQQ QVEEPQAEIE ESSPQQEEDA NSKSTQDASV EPDAKVPPQV DTEEDAPAFT PTPNTVENEF GVPQEEDWLL DEPELESETQ PEQEQNSGNK SEPESSELAS ETDSATNAEE EFDFDELDLP EFSEEDALAS MADEPAFDEP EPVEPERSEA DSATEAEDEF NFDELDLPEF SEEDALASMA GEPALDDPES IEPERSEAES ATEAEEEFDF DELELPEFSE EDALASMAGE PALDDPDRSE AESATEAEEE FDFDELELLE FSEEDALASM AGEPTLDEPE SIEPERSEAE SATEAEEEFD FDELELPEFS EEDALASMAG EPTLDEPESI EPERSEAESA TEAEEEFDFD ELELPEFSEE DALASMEEEP ELPSSETADI EPISGEDEEL SFDDQDLPEF NEEDVLASMN ESAPETPNVE AETSRPTLQA DNDHDALFEV FAQQNGFDTE PEVQPTATEG EPLSDLDDES SMANLLAEDA SSEVFEGQLD SDTIASAGMD FETMLDVGDD WDGFKPAADS VSSTEDVPED QRDVWNSSDA LSQPEIAQEN WAEQSNLDDF DPKKNQFMTI DELMAQVDKE GGEFEEEDLK LDVGLNEFPD VIGEIGDVDV DSNAEAAGKL DLAKIYLEMN DSQGAIKLLE EAIVYGEDDI RREAKSLIDA INGR
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