Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002844 |
Symbol | |
ID | 8556572 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1371870 |
End bp | 1372076 |
Gene Length | 207 bp |
Protein Length | 68 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646405935 |
Product | cytochrome c-type biogenesis protein CcmD interacts with CcmCE |
Protein accession | YP_003285471 |
Protein GI | 262393617 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3114] Heme exporter protein D |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATTTTG AATCTCTGAG CGACTTTTTT GCCATGGGTG GCTACGCATC ATACGTATGG AGTGCGTTTG GTATTACTTT CTTATCCATG CTGATTCTTC TGATCACTAG CCTTCGCCGC GGTGATGCAT TATTGAAAGA AGTGAAAGCA AAAATTGACC GTCAAGCTCG TATCGACGCA GCGAAGAACA TGGAGAACAC CTTATGA
|
Protein sequence | MHFESLSDFF AMGGYASYVW SAFGITFLSM LILLITSLRR GDALLKEVKA KIDRQARIDA AKNMENTL
|
| |