| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002827 |
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| Symbol | |
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| ID | 8556555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1354473 |
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| End bp | 1355255 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405918 |
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| Product | flagellar biosynthesis protein FliR |
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| Protein accession | YP_003285454 |
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| Protein GI | 262393600 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGTACC CCACTAGCGT TGTCTTAGAT TGGATCGCAA ACTATTTCTG GCCCTACGTT
CGTATCTCTT CCATGCTGAT GGTGATGACG GTAACTGGGG CTCGATTTGT CTCACCACGA
ATCCGCCTTT ACCTCGGGTT AGCCATCACT TTTGCCGTCA TGCCGGCGAT CCCTGCAGTG
CCTCAAGACA TTGAGTTGCT CTCGTTTCGG GGTTTTATGA CCATTGCCGA GCAAATGATC
ATCGGTATTG CGATGGGTAT GGTCACTCAA TTTATGATTC AAACCTTTGT CTTGTTGGGA
CAAATATTGG GTATGCAATC AAGTTTGGGT TTCGCTTCTA TGGTTGATCC CGCAAATGGT
CAGAACACGC CATTGCTTGG TCAGTTATTC ATGTTTTTGA CGACAATGTT TTTCCTTGCC
ACCGATGGGC ACTTGAAAAT GCTGCAATTG GTGGTGTTCA GCTTTAAAAC CTTGCCGATT
GGCTCCGGCT CGCTCAACGC GGTTGATTTC CGTGAAATGG CAGGCTGGCT TGGTATTATG
TTCCAAACGG CACTGAGTAT GTCTCTATCT GGCATTATTG CACTACTTAC CATTAACTTG
TCGTTTGGTG TAATGACCCG TGCCGCACCA CAGCTGAATA TCTTCTCGCT TGGTTTTGCT
TTTGCGTTGA TGGTGGGCCT ATTACTTTGT TGGTACATAC TGGCTGGCCT TTATAGTCAT
TATGAAATGT TCTGGACAGT GGGTGAGGCG CAGATTTGTC GACTCATTCG CTTGGAGTGC
TAA
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| Protein sequence | MEYPTSVVLD WIANYFWPYV RISSMLMVMT VTGARFVSPR IRLYLGLAIT FAVMPAIPAV
PQDIELLSFR GFMTIAEQMI IGIAMGMVTQ FMIQTFVLLG QILGMQSSLG FASMVDPANG
QNTPLLGQLF MFLTTMFFLA TDGHLKMLQL VVFSFKTLPI GSGSLNAVDF REMAGWLGIM
FQTALSMSLS GIIALLTINL SFGVMTRAAP QLNIFSLGFA FALMVGLLLC WYILAGLYSH
YEMFWTVGEA QICRLIRLEC
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