Gene VEA_002822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002822 
Symbol 
ID8556550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1351383 
End bp1352429 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content47% 
IMG OID646405913 
Productflagellar motor switch protein FliM 
Protein accessionYP_003285449 
Protein GI262393595 
COG category[N] Cell motility 
COG ID[COG1868] Flagellar motor switch protein 
TIGRFAM ID[TIGR01397] flagellar motor switch protein FliM 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGATC TATTAAGCCA AGACGAAATT GATGCGCTAT TGCACGGGGT TGACGATGTT 
GATGACGTCG ATGAACCGAT AGAAAACGAC AACGAAGGTG CCGTCAATTT TGATTTCTCG
TCGCAAGACA GGATTGTACG TGGTCGAATG CCGACGCTCG AACTTATCAA CGAGCGCTTT
GCACGACACA TGCGTATTAG TCTGTTTAAT ATGCTGCGTA AAACGGCAGA AGTGTCGATC
AATGGCGTGC AGATGATGAA GTTTGGCGAA TACCAAAACA CATTGTACGT GCCAACCAGT
TTGAACATGG TGCGTTTTCG TCCGTTAAAA GGTACAGCGT TGATCACCAT GGAGGCTCGC
TTAGTCTTTA TTCTGGTAGA AAACTTCTTT GGTGGGGATG GTCGATTCCA TGCCAAAATC
GAAGGGCGCG AATTTACCCC AACGGAACGC CGCATCATTC AGCTGCTGCT GAAGATTGTA
TTTGAAGACT ACAAAGAAGC GTGGTCGCCA GTGATGGGGG TGGAGTTCGA ATATCTCGAC
TCTGAAGTAA ACCCAAGTAT GGCTAACATT GTCAGCCCGA CAGAAGTGAT TGTCGTGAGT
TCATTCCATA TAGAAGTTGA CGGCGGTGGC GGCGATTTTC ATGTCGTTAT GCCTTACTCC
ATGGTTGAAC CTATCCGTGA ACTGTTGGAT GCAGGTGTTC AGTCCGACAA GATGGAGACT
GACGTCCGTT GGAGCTCAGC ATTGCGTGAA GAGATTATGG ATTGTCCGGT TAACTTCCGC
GTTAACTTGC TTGAAAAAGA CATCTCTTTG CGTGACCTCA TGGAATTGCA ACCGGGTGAC
ATCATCCCGA TTGAAATGCC AGAACATGCG ACAATGTTTG TGGAAGACCT GCCGACCTAT
CGCGTAAAAA TGGGCCGTTC GGAAGACAAA TTAGCGGTGC AAATTTCTGA GGAAATTGAG
CGCCCACATG TAGTCAAAAC AGATTTAGCT TTCTTGGGCA AAGACATCAT GTCTGAGCTT
GAGAATGAAG ACGATATAGA CGATTAA
 
Protein sequence
MTDLLSQDEI DALLHGVDDV DDVDEPIEND NEGAVNFDFS SQDRIVRGRM PTLELINERF 
ARHMRISLFN MLRKTAEVSI NGVQMMKFGE YQNTLYVPTS LNMVRFRPLK GTALITMEAR
LVFILVENFF GGDGRFHAKI EGREFTPTER RIIQLLLKIV FEDYKEAWSP VMGVEFEYLD
SEVNPSMANI VSPTEVIVVS SFHIEVDGGG GDFHVVMPYS MVEPIRELLD AGVQSDKMET
DVRWSSALRE EIMDCPVNFR VNLLEKDISL RDLMELQPGD IIPIEMPEHA TMFVEDLPTY
RVKMGRSEDK LAVQISEEIE RPHVVKTDLA FLGKDIMSEL ENEDDIDD