| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002777 |
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| Symbol | |
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| ID | 8556505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1307252 |
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| End bp | 1309696 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646405868 |
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| Product | acyl-CoA dehydrogenase short-chain specific |
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| Protein accession | YP_003285404 |
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| Protein GI | 262393550 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.383126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATCT TGCTCTCAAT CATCACGATG ACGGTCGTGT TAGGCATTAC GCTCTACCAC
CGCATGTCTC TCGTGAAATC TATTAGTTTA CTCACAGCAG CTATGTTAGC GCTTACAGTA
ACAGGCGCGG TTGGCGTTAC TGGTTGGACG ATTTACGTTC TTGCTGCCGC TGTATTCGCG
GTTCCTGGCG TACGTCAGTC TTTGATAAGT CGCAAAGCAT TAGCGCTTTT CAAGAAAGTG
CTGCCAGCTA TGTCTCAAAC CGAAAAAGAA GCGTTAGACG CAGGTACCGT CTGGTGGGAA
GCCGAACTAT TTAAAGGCAA ACCAGAATGG CAAAAGCTAC ACGCGATTCA AGCACCTAAG
TTAAGTGCGG AAGAACAAGC CTTTTTAGAC GGCCCTGTGA ATGAAGTGTG CGCCATGGTG
AGTGATTTCC AAGTGACCCA TGAACTCGCG GACTTACCGC CAGAAGTTTG GCAATACCTG
AAAGATCACA AATTCTTCGC CATGATCATT AAGAAAAAGT ACGGTGGTCT TGAGTTCTCA
GCATACGCTC AATCACTAGT ACTACAAAAA CTAACGGGTG TTTCTGGCGT TCTATCGTCT
ACCGTTGGTG TTCCTAACTC TTTGGGCCCT GGTGAGCTAC TGCAACACTA CGGTACTGAA
GATCAGAAAA ATCATTACTT ACCGCGCCTA GCTGAAGGTA AGGAAATCCC TTGTTTCGCC
TTAACGAGTC CAGAAGCAGG CTCTGACGCT GGCTCTATTC CAGATTACGG TGTGGTTTGT
AAAGGCGAAT GGGAAGGAAA AGAAGTACTG GGTATGCGCC TGACTTGGAA CAAGCGCTAC
ATCACCCTAG CGCCAGTCGC AACGGTACTA GGCTTAGCAT TTAAACTTCG CGATCCTGAA
GGTTTGCTAG GCGACAAAGA AGATCTTGGC ATCACTTGTG CGCTTATCCC AACTGATGTC
AAAGGTGTTG AGATTGGTAA CCGACACTTC CCGCTCAATG TGCCATTCCA AAATGGTCCA
ACGCGCGGTA AAGACATCTT TGTTCCTATC GATTTCATTA TCGGTGGTGA AAAAATGGCG
GGCCAAGGTT GGCGTATGCT GGTTGAGTGT CTATCGGTTG GTCGTGGTAT CACGCTACCT
TCAAACTCAA CAGGTGGCAT CAAAACTGCG GCAATGGCAA CGGGCGCTTA CTCACGCATT
CGTCGCCAGT TCAAACAACC TATCGGTCAC ATGGAAGGCG TAGAAGAGCC ATTGGCACGT
CTGGGTGGTA ACGCTTACGT AATGGACGCG GCAAGCAACT TAACCGTGGC AGGTATCGAC
CTAGGTGAAA AACCTTCGGT TATCTCAGCT ATCGTGAAGT ACCACTGTAC TCATCGCGGT
CAGCAAAGCA TCATCGACGC AATGGACATC GTGGGCGGTA AAGGGATCTG TATGGGACCT
TCTAACTTCC TAGCCCGTGG TTACCAAGGT GCACCAATCG CGGTAACGGT TGAGGGTGCA
AACATTTTAA CACGCTCAAT GATCATCTTT GGTCAAGGTG CGATTCGCTG TCATCCATAC
GTTCTTGAAG AAATGAACGC CGCGTACTCT GATGCCAGTG ACTCTGTAGA GAAGTTTGAT
AAAGCGCTTG CTGGTCACGT GAGCTTTACC ATGAGTAACC TCGTTCGCAG TATCTGGTTT
GGTTTGAGCG ACGGTTTAGG TTCTTCATCA CCAACCAAAG ATGCAACCAA GCGTTACTAC
CAACAGTTGA ACCGCTACAG TGCAAACCTT GCCTTGCTAT CGGATATCTC GATGGCAGTG
CTAGGTGGCT CTTTGAAGCG TAAAGAGCGT CTATCAGCGC GTCTTGGTGA CATTCTAAGC
CAGCTATATT TAAGCTCTGC GACGTTGAAA CGTTTTGAGC AAGATGGCCG CCCAGTCGAA
GATTTACCAT TAGTACACTG GGGTCTACAA GACAGTTTGA AACAAGCGGA AGTGGCGGTA
GACGAATTCT TAGCAAACTT CCCGAACAAA GTGATTGGTC GTGCACTGCG CGTGTTAATC
ATGCCATTCG GTCGTGTACG CAAAGCGCCA AGCGATAAAC TAGACAGCAA AGTGGCGCGC
ATTCTACAAA CGCCTAGTGC AACGCGCTCA CGCATTGGTC GCGGTCAGTA CCTTGAACCA
ACCGAGCACA ACGCAGCAGG TAAGATTGAG CTTGCCCTGT CAGTCATTCT TCAAGCTGAG
CCAGTGTTCG ACAAAGTATG TAAAGCTCAA GGCAAACGTC GTCCATTCCT ACGTTTGGAT
ATGATTGCTC AGGAAGGGCT AGAGCAAGGC TTGATCACGC AAGAAGAAGC CGACCTACTA
AGAGAAGCTG AACAGCATCG TCTGGATACA ATCAACGTTG ACGACTTTGA GCCGGAATTG
CTCGCAGCAA AGCCGCTATA CCCTCAGATG GATAGCGTTG CCTAA
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| Protein sequence | MDILLSIITM TVVLGITLYH RMSLVKSISL LTAAMLALTV TGAVGVTGWT IYVLAAAVFA
VPGVRQSLIS RKALALFKKV LPAMSQTEKE ALDAGTVWWE AELFKGKPEW QKLHAIQAPK
LSAEEQAFLD GPVNEVCAMV SDFQVTHELA DLPPEVWQYL KDHKFFAMII KKKYGGLEFS
AYAQSLVLQK LTGVSGVLSS TVGVPNSLGP GELLQHYGTE DQKNHYLPRL AEGKEIPCFA
LTSPEAGSDA GSIPDYGVVC KGEWEGKEVL GMRLTWNKRY ITLAPVATVL GLAFKLRDPE
GLLGDKEDLG ITCALIPTDV KGVEIGNRHF PLNVPFQNGP TRGKDIFVPI DFIIGGEKMA
GQGWRMLVEC LSVGRGITLP SNSTGGIKTA AMATGAYSRI RRQFKQPIGH MEGVEEPLAR
LGGNAYVMDA ASNLTVAGID LGEKPSVISA IVKYHCTHRG QQSIIDAMDI VGGKGICMGP
SNFLARGYQG APIAVTVEGA NILTRSMIIF GQGAIRCHPY VLEEMNAAYS DASDSVEKFD
KALAGHVSFT MSNLVRSIWF GLSDGLGSSS PTKDATKRYY QQLNRYSANL ALLSDISMAV
LGGSLKRKER LSARLGDILS QLYLSSATLK RFEQDGRPVE DLPLVHWGLQ DSLKQAEVAV
DEFLANFPNK VIGRALRVLI MPFGRVRKAP SDKLDSKVAR ILQTPSATRS RIGRGQYLEP
TEHNAAGKIE LALSVILQAE PVFDKVCKAQ GKRRPFLRLD MIAQEGLEQG LITQEEADLL
REAEQHRLDT INVDDFEPEL LAAKPLYPQM DSVA
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