| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002769 |
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| Symbol | |
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| ID | 8556497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1297478 |
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| End bp | 1299061 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405860 |
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| Product | membrane-bound lytic murein transglycosylase D precursor |
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| Protein accession | YP_003285396 |
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| Protein GI | 262393542 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0709625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTTTGA AGTATACCTG GGCGTTGGCG TTGTTATTAT CTGGCTGTCA ATTGACTCAG
TCAGACTCAA CGTCTTCTAC ACCAGAAACC AATAAATCTG AGCAGACTGC AAAACAAAAT
GCAGCGAAGA CTCAACCGGG CAACACATCG TCTTTAGCAA AAAAATCCGC TAACGACGCG
CCTAAAGTTC TTTCCCCTCA GGAACAAGAA GATGTATGGC AACGTATCGC CATGCAACTT
GAAATGGATA TTCCAAACCA TAAGAAAGTG GACTACTACC GTACGTGGTA TCTAAAGCAC
CCGAATCACC TTTACACAGT GTCTAAGCGT GCGACTCCTT TTCTATACAT GATCACAAAA
CGTATCGAAG AACGTGGACT CCCAATGGAG CTTGCTTTGC TTCCTGTGGT GGAAAGCTCA
TTCGATGCCT TTGCCTACTC ACACGGTAGC GCGGCTGGAT TGTGGCAATT TGTCCCTGGC
ACCGGAAAGA TGATGGGACT AGAGCAAAAC TACTGGTATG ACGGTCGCCG AGATGTGGCA
GCAGCAACGG ATGCCGCACT GGACTACCTT GTACAACTAA ACGAGCGTTT TGATGGTAGC
TGGGAGCATG CAATTGCTGC TTACAACAGT GGTGGTGGCC GTGTTTCTAG CGCAATTCGT
AAGAATAAAA AGCTCGGTAA ACCTACCGAT TTCTTCTCAT TGGACTTACC AAAAGAGACC
AGCAGTTACG TACCTAAGCT GCTAGCCTTG GCTGACGTCA TCGCAAACCA AGATAAGTAC
GGACTTAATA TTCCTGCGAT TCCAAACAAG CCTGTTCTAA CGCTTGTCGA TCCGAAAGAA
CAGCTTGATC TAGCCATTGC TGCAGATTAT GCCGGCATTG GTGTGAAAGA GTTACAAAGT
TACAACCCTG CATACAACCA ATGGTCGACT GCGCCTGAAG GTCCGCACAA ACTTTTGATT
CCGGTAGAGA AAAAAGAGAC TTTTCTCTCT AAGGTGGAGA AAAACCGTGG TAAAGGGATG
AAGGTCGCTC GCTACAAGGT GAAGTCTGGT GACTCTTTAA GTGTGCTAGC TAATAAATAC
GGCACAACCA CAAAAGTGAT TCGACGTGCA AACGGCCTGT CGAATAACAA TATTCGTATT
GGCCAGTACC TACTGATTCC GACGTCAACA AAAGACGATG CGAAATACGC ACTAACGGCA
CAAAATCGAT TAAGCAAGAC TCAATCACGT GCTCGTGGAC AACTCAAGCT CACTCATGTC
GTTCAGTCTG GAGAAAGTTT GTGGTCAATC GCACGTGAAA ATAAAGTGTC GTATAAATCG
TTAGCAAAAT GGAATGGCAT GGGCCCTAAA GATCCATTGC GTGTGGGTCA AAAGCTCGTG
ATTTGGAAGG ACTCAGACAA AGGTGCTGTG ATCCGTACCG TTTTCTACAA CGTTCGCTCC
GGTGACACCA TTAGCGGCAT TGCAAGCAAG TTCAAAGTAA AAACAAACGA CATCGTAAAA
TGGAACTCGC TACACAAGAA AAAATACTTA CAACCAGGTC AAAAACTTAA GTTGTACGTT
GACGTAACGA AGGTAAGTGT ATGA
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| Protein sequence | MRLKYTWALA LLLSGCQLTQ SDSTSSTPET NKSEQTAKQN AAKTQPGNTS SLAKKSANDA
PKVLSPQEQE DVWQRIAMQL EMDIPNHKKV DYYRTWYLKH PNHLYTVSKR ATPFLYMITK
RIEERGLPME LALLPVVESS FDAFAYSHGS AAGLWQFVPG TGKMMGLEQN YWYDGRRDVA
AATDAALDYL VQLNERFDGS WEHAIAAYNS GGGRVSSAIR KNKKLGKPTD FFSLDLPKET
SSYVPKLLAL ADVIANQDKY GLNIPAIPNK PVLTLVDPKE QLDLAIAADY AGIGVKELQS
YNPAYNQWST APEGPHKLLI PVEKKETFLS KVEKNRGKGM KVARYKVKSG DSLSVLANKY
GTTTKVIRRA NGLSNNNIRI GQYLLIPTST KDDAKYALTA QNRLSKTQSR ARGQLKLTHV
VQSGESLWSI ARENKVSYKS LAKWNGMGPK DPLRVGQKLV IWKDSDKGAV IRTVFYNVRS
GDTISGIASK FKVKTNDIVK WNSLHKKKYL QPGQKLKLYV DVTKVSV
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