| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002725 |
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| Symbol | |
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| ID | 8556453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1253321 |
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| End bp | 1255036 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646405816 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_003285352 |
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| Protein GI | 262393498 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0739643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTACCA GTAATTATCT TCTTTCTACT CTGAAGGAGA CTCCAAACGA CGCAGAAGTA
GTGAGCCACC AGCTCATGCT ACGTGCAGGT ATGATCCGTA AGCTGGCTTC AGGTCTATAC
ACCTGGCTAC CTACTGGTCT ACGTGTACTG CGTAAAGTCG AAAACATCGT TCGTCAAGAA
ATCGACAATG CAGGCGCAGT CGAAACTTTG ATGCCCGTTG TTCAGCCGTT TGAACTATGG
GAAGAGACAG GCCGCAGCGA AAAGATGGGT CCTGAGCTAC TTCGCTTTAC TGACCGTCAT
GTTCGTCCGT TTGTACTTAG CCCAACCGCT GAAGAAGTGA TCACTAGCCT TGTTCGCAAT
GAAGTGAGCT CTTACAAACA GCTTCCGCTA AACCTGTACC AAATCCAAAC CAAATTCCGT
GACGAACGTC GTCCACGCTT CGGTGTAATG CGTTCACGTG AATTCTCAAT GATGGATGCG
TACAGCTTTG ACATTGATAA AGACGGCCTA CAAAAGTCAT ACGACGCAAT GCACGATGCT
TACTGCAAAG CATTCGATCG CATGGGTCTG GATTACCGTC CTGTACTAGC AGATAGCGGT
GCTATCGGCG GTAGCGGCTC TCAAGAGTTC CACGTACTGG CTGAAAGTGG CGAAGACATC
ATCGCATTCT CTACCGAGTC AGATTACGCG GCAAACATCG AAAAAGCAGA AGCACTAGCT
CCAGCCTCTG AAGCAGCGGC ACCAACGCAA GAAATGACGT TGGTAGATAC GCCAAACGCA
AAAACAATCG CTGAATTGGT TGAACAGTTC GAGCTGCCAA TTGAAAAAAC AGTGAAAACT
TTGTTTGTGA AAGCGTCTGA CGAAGTTGAT GCACCAATCA TCGCGCTTAT CATTCGTGGC
GATCATGAGC TGAACGAAGT GAAAGCAGAA AACCTTCCTC AGGTTGCAGC TCCACTGGAA
ATGGCATCTG AAGAAGAAAT TCGTGAGCTT ATCGGTGCAG GCCCTGGTTC ACTAGGCCCT
GTTGGCCTTA AACTGCCGTT CATTGTTGAC CGCAGCGTTG CGGTAATGAG CGACTTCGGT
GCGGGCGCGA ACATCGATGG CAAACACTAC TTCGGCATTA ACTGGGGTCG TGACGCAGAG
CTTGGTCAAG TTGAAGACCT ACGCAACGTG GTTGAAGGCG ATCCAAGCCC ATGTGGTAAA
GGCATTATCC AGCTTAAGCG TGGTATCGAA GTTGGCCATA TCTTCCAACT TGGCAACGCT
TACTCCGCAG CGATGAACTG TGGTGTACTT GGTCCTGATG GTAAGAACGT CATCCTAGAA
ATGGGCTGTT ACGGCATCGG TATCACTCGC GTCGTTGCGG CTGCTATTGA GCAAAACCAC
GACAAATACG GCATCATCTG GCCAGATGCA ATCGCACCAT TCCAGGTTGC GATCGTTCCA
ATGAACATGC ACAAGTCAGA AGAAGTAAAA GAAGCCGCTG AGAAGTTGTA CGCTGAGCTA
ACGGCAATGG GCATCGAAGT CCTATTTGAC GACCGTAAAG AACGCCCAGG CGTAATGTTC
TCTGACATGG AGCTTATTGG TGTACCGCAT ACCATTATTA TCGGTGACCG CTCAATGAAA
GAAGGCAACT TCGAGTACAA GAACCGTGCT ACTGGTGAGA AAACGCCAGT CGCAATGACT
GATATTATCG AGCACGTAAA GGCTCAACTA AAGTAA
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| Protein sequence | MRTSNYLLST LKETPNDAEV VSHQLMLRAG MIRKLASGLY TWLPTGLRVL RKVENIVRQE
IDNAGAVETL MPVVQPFELW EETGRSEKMG PELLRFTDRH VRPFVLSPTA EEVITSLVRN
EVSSYKQLPL NLYQIQTKFR DERRPRFGVM RSREFSMMDA YSFDIDKDGL QKSYDAMHDA
YCKAFDRMGL DYRPVLADSG AIGGSGSQEF HVLAESGEDI IAFSTESDYA ANIEKAEALA
PASEAAAPTQ EMTLVDTPNA KTIAELVEQF ELPIEKTVKT LFVKASDEVD APIIALIIRG
DHELNEVKAE NLPQVAAPLE MASEEEIREL IGAGPGSLGP VGLKLPFIVD RSVAVMSDFG
AGANIDGKHY FGINWGRDAE LGQVEDLRNV VEGDPSPCGK GIIQLKRGIE VGHIFQLGNA
YSAAMNCGVL GPDGKNVILE MGCYGIGITR VVAAAIEQNH DKYGIIWPDA IAPFQVAIVP
MNMHKSEEVK EAAEKLYAEL TAMGIEVLFD DRKERPGVMF SDMELIGVPH TIIIGDRSMK
EGNFEYKNRA TGEKTPVAMT DIIEHVKAQL K
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