| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002700 |
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| Symbol | |
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| ID | 8556428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1229206 |
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| End bp | 1229829 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646405791 |
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| Product | RNA polymerase sigma-70 factor ECF subfamily |
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| Protein accession | YP_003285327 |
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| Protein GI | 262393473 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.61152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAGGAG ATGACTCCTC CCTAAAATTA AGGCCGATTA TGATGAGTGA TAGCCCAAAA
AAACTGGGGC GCAGTGATTG GAACGATTAC ATGGACAAAG TGAAAGCTCG AGATAAAGAC
GCGTTCGCTT TTGTATTCCG TTTTTACGCA CCCAAGCTGA AGCAATTCGC TTACAAACAT
GTTGGTAATG AGCAAGTTGC TATGGAGATG GTGCAAGAGA CCATGGCGAC AGTTTGGCAG
AAAGCGCACC TCTATGATGG GGAAAAGAGC GCGTTATCGA CTTGGATATA CACCATAATC
CGAAACCTAT GCTTTGATCT GTTGAGAAAG CAGAAAGGTA AGGAGTTACA CATTCATTCT
GATGACATTT GGCCGTCAGA ATATTATCCA CCAGATCTTG TTGATCACTA TTCACCAGAG
CAAGACATGT TGAAAGAACA GGTGGTTAAA TTTTTAGATA TTTTACCGAA AAATCAGAGA
GACGTTTTAC AAGCGGTGTA TCTTGAAGAG CTACCTCATC AACAGGTCGC TGAATTATTT
GATATACCCC TCGGTACCGT AAAATCCAGG CTGAGGCTTG CAGTAGAAAA GCTAAGGCAT
TCAATGCATA CGGAGCAACT ATGA
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| Protein sequence | MGGDDSSLKL RPIMMSDSPK KLGRSDWNDY MDKVKARDKD AFAFVFRFYA PKLKQFAYKH
VGNEQVAMEM VQETMATVWQ KAHLYDGEKS ALSTWIYTII RNLCFDLLRK QKGKELHIHS
DDIWPSEYYP PDLVDHYSPE QDMLKEQVVK FLDILPKNQR DVLQAVYLEE LPHQQVAELF
DIPLGTVKSR LRLAVEKLRH SMHTEQL
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