Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002686 |
Symbol | |
ID | 8556414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1214579 |
End bp | 1216726 |
Gene Length | 2148 bp |
Protein Length | 715 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405777 |
Product | exodeoxyribonuclease V alpha chain |
Protein accession | YP_003285313 |
Protein GI | 262393459 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACAA ATCACAATCT TCATTCTGAC CAAGATAGCC TATTGGTAGT GTTGGAACGC TTGGCGCACA AAGGCGCGCT TCGTCAGCTC GACTACCAAT TCGCCTGCTT TATTGATTCT CAAACTAATG ATGAACAGCC TGACAACCAA GCATTGGCGT TTATCGCGGG TGTTGTCAGT AGTGAGCTTG GCAAAGGACA TATCTGTCTG TCTCTGTTCG ATGCACAAGG GCAATCTACG GATTTAGCCA GTAAGCTAGG GCTGTTTGGT GAGTCGGCAT TGGCGCTCAA CACACAGTTG CAAGGCATAG ACTGGATTGA AGTATTACAA AATTCCAGCG TGGTCGGCGC GCAAGGAGAA GCCTTGCCTT TAATGTTCGA TGGTGAGCGT CTGTATCTGC ACCGCTATTG GCATTATGAA GTGACACTGG CGGAAAAGCT CAATCAGTTG GGCGCCGCAG TTAACTTGCA ACCACAAGAG TTTGTGCGAT TATCCGAGTT GCTCAACCAT CTGTTTGCGC GCCAATACCA TTTTCTATTT AACGCGTTAG GCAAAGCAGT AGAAGCGGGA AGCAGCAATC AAGTGTTGCG TCAGCAATTG GTGTGTGACC ACCTTGATGT GGTCGCAAGC GAATCGTTGG ATTGGCACGC CATTGATTCC GTGCTTAGCA ATGCGCGCAA GGTTCAGGAT TTGCAAACAC TGGATGAACT CGTACCACTC TCAGCTTGTG TGAACTGGCA AAAAGTCGCG GCGGCGGTTG CGTTAACTCG TCGATTTGCT GTGATTTCTG GTGGTCCTGG TACGGGTAAA ACGACGACAG TAACCAAATT GCTTGCTGCT TTGATTGAAC AGGCGACGCA CGAGAAAAAT CTAACCATCA AGCTGGTGGC CCCGACGGGG AAAGCGGCGG CGCGATTAAC CGAGTCCATT GGTAAAGCAG TGCAAGAACT GCCAGTTTCT CCGGAGCTAA AAGCCAAAAT TCCGACTGAA TCGAGCACCT TGCATCGATT ACTTGGCGCG ATTCCTAATA GCGCAGAATT TCGTCACAAC AAGCAAAATC CACTGCATTT GGATATTTTA GTTATCGACG AAGCGTCGAT GGTCGATTTA CCGATGATGT ACAAAGTGGT CGATGCCTTA CCGAAACATG CGCGGCTGAT TTTGTTAGGT GATAAAGACC AACTTGCCTC AGTTGAAGCA GGGGCAGTGT TGGGTGATAT CTGTTCGTTC CATGCATTGG GTTATGGCAA AGAGCAGGCG TCAGCCATCG CAAAACTGAC GGGGTTCGAT ACTTTAGCCC ATACGGGTAA CAGTGCATCT AGCATTGCTG ATAGTTTATG TATGCTGCAA AAGAGCTACC GATTTGACGC TCGCTCAGGC ATTGGTCAGT TGGCAAAAGC GGTTAATTCC GGTTCTGCTG CGAGCGTAGA TAACGTCTGG GCGCGTGACT TTTCTGACAT CGAACATTTC GCGCTAAGTA GTCAGCATTA CAACCAAATG ATGCAGACGT TGGTGCAGGA ATACGGTCGT TACCTCAAAC GAATTGGACA ACAGGAAACT GATCCTAAAA CCGGAGAGCC AGAGTCGCTA ACGCACAAAG CCAAAGCGGT GTTAGATACC TTCAACCAAT GCCGACTGCT GTGCGCGATC CGTGAAGGTG ACTTCGGTGT GGCTGGGCTA AACCAACGCA TCGAGAAAGC GCTCGCGGCG CGCAAGTTAA TTCAGGTTCA GGATGAAATT TGGTATCACG GCAGACCCGT CATGGTTACG CGTAATGATC ACGGTTTAGG TTTGTATAAC GGTGATATTG GTATTTGTAT GCGAGATGAC AGTGAAGAAG AACCGCGTTT GAAAGTCTTT TTCGAGTTAC CTGACGGCAG TGTGAAATCG GTCTTGCCAA GCCGAGTGCC TGAACATGAA ACGGCTTACG CCATGACCAT CCATAAATCG CAAGGCAGTG AATTTGATTA CACCCTGATG ATTTTGCCAC CAGACTTTAG CCCGATATTA ACTCGTGAGT TGATTTACAC AGGCATTACC CGCGCGAAAA AGCGTTTAGC TCTTTACGCC GAACTCAATG TTCTGAAGCG AGGTATTAAA GTGAAAACCA CTCGTGCGAG TGGATTAGTA CAGCGGCTTA CTAACTAA
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Protein sequence | MTTNHNLHSD QDSLLVVLER LAHKGALRQL DYQFACFIDS QTNDEQPDNQ ALAFIAGVVS SELGKGHICL SLFDAQGQST DLASKLGLFG ESALALNTQL QGIDWIEVLQ NSSVVGAQGE ALPLMFDGER LYLHRYWHYE VTLAEKLNQL GAAVNLQPQE FVRLSELLNH LFARQYHFLF NALGKAVEAG SSNQVLRQQL VCDHLDVVAS ESLDWHAIDS VLSNARKVQD LQTLDELVPL SACVNWQKVA AAVALTRRFA VISGGPGTGK TTTVTKLLAA LIEQATHEKN LTIKLVAPTG KAAARLTESI GKAVQELPVS PELKAKIPTE SSTLHRLLGA IPNSAEFRHN KQNPLHLDIL VIDEASMVDL PMMYKVVDAL PKHARLILLG DKDQLASVEA GAVLGDICSF HALGYGKEQA SAIAKLTGFD TLAHTGNSAS SIADSLCMLQ KSYRFDARSG IGQLAKAVNS GSAASVDNVW ARDFSDIEHF ALSSQHYNQM MQTLVQEYGR YLKRIGQQET DPKTGEPESL THKAKAVLDT FNQCRLLCAI REGDFGVAGL NQRIEKALAA RKLIQVQDEI WYHGRPVMVT RNDHGLGLYN GDIGICMRDD SEEEPRLKVF FELPDGSVKS VLPSRVPEHE TAYAMTIHKS QGSEFDYTLM ILPPDFSPIL TRELIYTGIT RAKKRLALYA ELNVLKRGIK VKTTRASGLV QRLTN
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