Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002684 |
Symbol | |
ID | 8556412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1207086 |
End bp | 1210577 |
Gene Length | 3492 bp |
Protein Length | 1163 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405775 |
Product | exodeoxyribonuclease V gamma chain |
Protein accession | YP_003285311 |
Protein GI | 262393457 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1330] Exonuclease V gamma subunit |
TIGRFAM ID | [TIGR01450] exodeoxyribonuclease V, gamma subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTTACTG TTTATCACTC CAACCAAGTT GACGTTCTTA AATCACTCCT TGTCGAACTG ATTCGAATCG GTCCGCTGGA AAACCCGTTC GAAAAAGAAC AAATTCTGGT TCAAAGTCCG GGCATGTCCC AGTGGCTAAA AATGGAATTG GCCAAAGAGT TTGGTGTTGC CGCGAACATT GATTTTCCGC TTCCTGCTAC CTTCATTTGG GAAATGTTTA CGCAGGTGTT GCCAGACGTG CCAAAACGCA GTGCGTTTAA CAAAGAAGCG ATGACTTGGA AGTTGATGCA TCTGCTGCCG GGGCTTCTCA ACCAAGACGT GTTTTCGCCG TTAGCGCAGT ACCTCAAAGA TGACAGTGAT CACTCTAAGC TGTATCAGCT GGCTGAGAAA ATTGCCGATA TTTTCGATGG TTACTTGGTG TATCGTCCGG AGTGGATCGC AAGTTGGGAA GCTGGGCATA GTGTGCCAGA GCTGGAAGAT GAGCATCCGT GGCAGCCGAT CTTATGGCAA GCGTTGTATG ATCACACTGT GTCATTAGGA CAGTCTCCAT ATCACCGTGC CAACCTTTAT GAGCACTTTA TCGACACGTT AGAGAGTTTT AACGGCAATT TTGACCATTT ACCCAAGCGT TTGTTTGTTT TTGGCATTTC TTCGTTGCCG CCTCGCTATA TGGATGCGCT AAAAGCAATT GGTGAACACA TCGACGTGCA TCTGATGTTC ACCAACCCGT GTCGTTATTA CTGGGGTGAA GTTCGAGATC GCAAATATCT GGCTCGTTTG GCGGCGAAAC ATCGTCAGCA CGTTGTGTGG CATGACGATC ACTCGGAAGT GCAAGGTGAA ACTGAGCAAC TGAAAGGATC ACTGGAAGAT AATGTGATCG ATGAGCTGCA CACCGATGTG GTCGGAAACA GTCTGTTGGC GTCCATGGGT AAACTCGGGC GTGACAATAT GTATCTGTTG TCTCAGCTGG AGTCTCATGA AATTGAAGCG TTTGTTGATG TTGAGCGCGA CAGTCTGCTC CATCAATTGC AAGCGGATAT TCTCAATCTT GAAGAACATC AAGATGACCA ACAGATTGAA AACAGTCATC ACAAACAAGT GGTTCGCTTG GGTGATAAAT CACTCAGCCT GCACGCTTGC CACAGCCCGA TGCGTGAAGT GGAAGTGCTG CATGATCAAC TATTGGCGAT GTTCGATGCT GACCCAACGT TAAAACCGCG CGATATTATC GTGATGGTCG CGGACATCAA CGCTTACAGC CCTGCGATTC AGGCGGTCTT TGGTAACGCA CCGGGTGAGC GTTTTATTCC CTATTCGATT TCTGACCGAA CCGCCGATCA AGAGAGCCCA ATTCTGGCCG CATTTATGCA GTTGGTGAAC TTACCCAATA CGCGCTGTTT GGCATCAGAA CTACTCGAAC TTCTGGAAAC TCCAGCGATA TTAAAGCGTT TTGAACTCAG CGAAGATGAT TTCTTACAAG CCAAACAATG GGTTGAAGAA TCGGGAATTC GCTGGGGGTT GGATGCCAAT ACCGGACGCG AATTTGAACT GCCGGAAACC CGTCAAAACA CATGGCAATT TGGTATTCAA CGCATGTTGC TTGGCTACGC GATGCCAGAA TCCGCAGGTT TGTTTGAAAC CGAGCAAGGC AGTTTGTCTC CGTACAACGA AGTGCAAGGC ATGGGCGCAG AGCTGGCGGG CAAGTTGGCA CACTTTATCC AACAAATTAG CACTTATCGA AGCAAACTTT CTCATGTTCA GACTATTGAT AGTTGGCGAG AGACATTAGT TTCACTGCTG GATGACTTCT TCTCGGTTGA GTTAGAAGGT GAAATGGCGC TCAAATCCAT TCGAGATACG CTCAGCCAAC TCAAAGAGCA ATTAGCTGAT GCCGCATTTG ATGATGCGTT ATCGCCGTCG ATCATCAGCC AATACCTTCA AAACAAATTA TCTGGCACAC GAGTCAGCCA GCGCTTCCTG GCTGGTCAAG TGAACTTTTG TACCCTGATG CCGATGCGAT CTATTCCGTT TAGAACCGTA TGTCTACTGG GGATGAATGA CGGCGTGTAC CCGCGTTCTA TGCCGCCAGA AGGCTTTGAC TTGATGACGG GAAGAACCAA GCCGGGCGAC CGTTCGCGCC GAGATGATGA CCGTTACCTA TTCCTCGAAG CGATGTTGTC TGCACAGCAA ACGCTCTACA TCAGTTATGT TGGCCGTTCA ATCCAAGACA ACACCGAGCG AGTGCCTTCG GTTCTGGTTT CTGAGCTGAT GGAATACTGC CACCAAAACT ATTGTTTAAG TGGTGATGAA GCGTTGCCCG TTGATGAGTC TGGCGACAAT TTATTAAATG CGTTGGTGAA TACCCACGCC ATGGTGCCGT TTAGCCCAAG TGCGTTCCAA GGCACGCACG CCAGCTACGC GAAAGAGTGG ATTCCAGCGG CATTGACTCA AAGTAGTCAA TCGCAAGGCT ATGTTCGTCG TGATTTTAAT CGGGCATTAG ACGACTATCT GTTAGGAGCG ACGTTCCCAC TTGAGCTCGA CTTAGTCGAG TTGCAACGTT TCTGGCGCTT ACCTGTGCAG TATTTTTTCA ATCGTCGCTT AAAAGTAATC TTTGAACCGC CACTGCCGGT GATGGAAGAC GACGAACCCT TTGTTTTAGG TGGTTTGGAA AGTTATCAAA TGCGTGATGA GCTGTTAGAA GCCTTGCTTG AAACGACATT GATGCAGCCA GAGAAAAAAA CAGAGGTGCT TAAACACTTT ATGAGTCAAC AGCGTGCGCA AGGCAAACTG CCGGTGGGGG CGTTTGGTGA TATCGAATTT GAAACCAACC GAGTTCAGGC GGAAGAGCTG GTGGATAAAC TGGCGTTTTT ATCTGGTGCG CCTCAAGACG ATTTGGAAAT CGACCTGACG TTTGACTCCT TATTTGAGCG AAATGAAGGC GAAGAGAAAA ACGTTCGCCT AACAGGTTGG CTAACCCAGT GTTACCAATC TGGGTTGATT CGCTATCGAA GCGGTAAGAT TCGATCGCAG GATTACCTTG CAGCGTGGAT CGATCACCTT GCCATGTCGG CGTCGGGTTA TGCCAAGAAA ACTCACCTGA TTGGCTACGA TCGTAAAGAA GGCGCGCTGC ATTTGATCTA CTCAGAAATT GCCGATGCGC AGTATGCCAA ACAGCTACTG ACTGAATTAG TTCGCTTATT CTTCGAAGGC ATGACTAAGC CTTTGCCTTA TTTCCCGAAA ACGGCGTTGG CTTGTGTTGA AGCGGGCTTT AGCCGCGGTC AGTGGGTCGA TGACGAAGAG AAATCTTTGA AGAAAATGGC TGACGCATTC AATGATGGCT TCATGAGCCC GGGTGAAGGC AATAATGCGT ACATCTCTCG AATTTGGCCT GCTTGGAATG ATGAGTTGGC CTCAGAAGTT CGTTTGCTGA CAGCATTAGT TTTGCAAGGT GCGCGCTTAG CGGTTCAAGA CGCTGATGAC GTAAAAGCGT AA
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Protein sequence | MFTVYHSNQV DVLKSLLVEL IRIGPLENPF EKEQILVQSP GMSQWLKMEL AKEFGVAANI DFPLPATFIW EMFTQVLPDV PKRSAFNKEA MTWKLMHLLP GLLNQDVFSP LAQYLKDDSD HSKLYQLAEK IADIFDGYLV YRPEWIASWE AGHSVPELED EHPWQPILWQ ALYDHTVSLG QSPYHRANLY EHFIDTLESF NGNFDHLPKR LFVFGISSLP PRYMDALKAI GEHIDVHLMF TNPCRYYWGE VRDRKYLARL AAKHRQHVVW HDDHSEVQGE TEQLKGSLED NVIDELHTDV VGNSLLASMG KLGRDNMYLL SQLESHEIEA FVDVERDSLL HQLQADILNL EEHQDDQQIE NSHHKQVVRL GDKSLSLHAC HSPMREVEVL HDQLLAMFDA DPTLKPRDII VMVADINAYS PAIQAVFGNA PGERFIPYSI SDRTADQESP ILAAFMQLVN LPNTRCLASE LLELLETPAI LKRFELSEDD FLQAKQWVEE SGIRWGLDAN TGREFELPET RQNTWQFGIQ RMLLGYAMPE SAGLFETEQG SLSPYNEVQG MGAELAGKLA HFIQQISTYR SKLSHVQTID SWRETLVSLL DDFFSVELEG EMALKSIRDT LSQLKEQLAD AAFDDALSPS IISQYLQNKL SGTRVSQRFL AGQVNFCTLM PMRSIPFRTV CLLGMNDGVY PRSMPPEGFD LMTGRTKPGD RSRRDDDRYL FLEAMLSAQQ TLYISYVGRS IQDNTERVPS VLVSELMEYC HQNYCLSGDE ALPVDESGDN LLNALVNTHA MVPFSPSAFQ GTHASYAKEW IPAALTQSSQ SQGYVRRDFN RALDDYLLGA TFPLELDLVE LQRFWRLPVQ YFFNRRLKVI FEPPLPVMED DEPFVLGGLE SYQMRDELLE ALLETTLMQP EKKTEVLKHF MSQQRAQGKL PVGAFGDIEF ETNRVQAEEL VDKLAFLSGA PQDDLEIDLT FDSLFERNEG EEKNVRLTGW LTQCYQSGLI RYRSGKIRSQ DYLAAWIDHL AMSASGYAKK THLIGYDRKE GALHLIYSEI ADAQYAKQLL TELVRLFFEG MTKPLPYFPK TALACVEAGF SRGQWVDDEE KSLKKMADAF NDGFMSPGEG NNAYISRIWP AWNDELASEV RLLTALVLQG ARLAVQDADD VKA
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