Gene VEA_002646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002646 
Symbol 
ID8556374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1160391 
End bp1161659 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content48% 
IMG OID646405737 
Producthypothetical protein 
Protein accessionYP_003285273 
Protein GI262393419 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4961] Flp pilus assembly protein TadG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAGGA ATATGCATAT AGCACCAAGG CGAACCCAGA AAGGGATTAC CTTAGTGTTG 
ATAAGCTTGG TTTTGTTGAT TCTGCTAGGC GTTGCGGCGT TTGGTATTGA TTTAAACCAC
CAAGTTCTTA ATAAAACACG TTTACAGAAT GCGGTCGATA CTGCGGCCCT TGCAGGTGCT
GTCGTTGCCG ATAAGACAGA GGATGTGAAT CAGGCTGAAA CCGCAGTGAG AACAACGCTT
GGTGGAATAT CAACCGAACC TGGAAATTCT GAGCTGACGT TTAGTGACAG TAATACAGCG
GTGACATTCT CGCATGATAT GCAGACGTTT GTAAGTGCAG CAAGTTTTAC ACCGCCATTG
GGGGAGTACG ATATTTATGT CCGCGTAGCG GTCACCGATA TTAGCCTAAC GCAGTATCTG
AGTGGTTTGT TTGGGATTGA TAAAGAGGTC TCTGCGAGTG CGGTTGCAGG GCGGAGTGCG
GCTATTGCAT ATACGTGTAA TTTAACGCCA ATCGCCATGT GTGGTGATCC TGCTGGTGAT
GTGAGTGATG CATGGGGGTA TCGTCCGCCG GGTTACGACC CTAATGTAGA TATGGATCCT
TCTCTAGTGC ATGAGCTGAA AGTCGGGGAT CAGAATAACA CCGATATGGG GCCCGGGAAC
TTTCAGTTAC TCGATTTTGG GCAAGGAACG GGTAATAGTG GTGCAGCCTT AGTTCGTGAT
GCATTGTCTG GTGCTTACAA CGGTTGCGCC TCAATTGGCG ATACCGTTAC GACTAAACCA
GGTAATAGTG CAGGTCCAGT TGCACAGGGA CTGAATGTGA GGCTCAACGA CTTTTCGGGA
CCGATTAAAA ATGACGGAAC GGTTTTACCA GACAAATACG TGAGAGAGCC CGATGTTTTG
GCTGAGACCG ATGCGGAGTA CGCAGGCGAC CTGTATTACG CCAACTATCG TCAGGAGCTA
AGCTCTTGTG AAAGCGGTGG TGCTTGTGAT GGCAGTAGTT ATACCGGTGA TGGTGGTCTG
AACGGACGCC GGATTTTGCG TATCCCTATC GTAGATTGTA CGGCTTCTAC AGGTAAGTCT
GATTTTGATG TTTTGGGCTT TGGTTGCTTC TTTTTACTAC AAAAAGTCAG TAACTCAGGT
CAATCATCAG TGTTTGGGCA ATTTCTTTAT GATTGTTTAA TTAATAACGG TTCGACTGGC
ACGGATCCGA CAGATAAAGG CTTCTACCGT ATCCAGCTGT ACAAAGATCC GTTTAGCGGG
GCCTCTTGA
 
Protein sequence
MRRNMHIAPR RTQKGITLVL ISLVLLILLG VAAFGIDLNH QVLNKTRLQN AVDTAALAGA 
VVADKTEDVN QAETAVRTTL GGISTEPGNS ELTFSDSNTA VTFSHDMQTF VSAASFTPPL
GEYDIYVRVA VTDISLTQYL SGLFGIDKEV SASAVAGRSA AIAYTCNLTP IAMCGDPAGD
VSDAWGYRPP GYDPNVDMDP SLVHELKVGD QNNTDMGPGN FQLLDFGQGT GNSGAALVRD
ALSGAYNGCA SIGDTVTTKP GNSAGPVAQG LNVRLNDFSG PIKNDGTVLP DKYVREPDVL
AETDAEYAGD LYYANYRQEL SSCESGGACD GSSYTGDGGL NGRRILRIPI VDCTASTGKS
DFDVLGFGCF FLLQKVSNSG QSSVFGQFLY DCLINNGSTG TDPTDKGFYR IQLYKDPFSG
AS