Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002627 |
Symbol | |
ID | 8556355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1136307 |
End bp | 1137080 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646405718 |
Product | putative deoxyribonuclease YjjV |
Protein accession | YP_003285254 |
Protein GI | 262393400 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00712504 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTCT TTGATACCCA TTGTCACTTT GACTTTGATG TATTCCAAGG TGACTTTGCA CATCAACTTC AGCTAGCTCA AACGCAAGGT GTGACAAGAA TTCTGATTCC TTCAGTGGGA CCTCAAAACT GGGCTCGTAT TCAAACCTTG GCAGATCAAC ATGCCAATTT GTATTACGCC CTTGGGTTTC ATCCGTATTT TCTTGAAGAT AACGTCGAGC AGCACGTTGC TGAATTGGAA CATTATCTAA AACAAAATGT TCCCCAGTGC GTGGCAATAG GAGAGTGTGG GCTAGATTTT GCCATTGATG TTGACCCACA GTTGCAAGAA AAGACACTTG AAGTTCAATT TGAACTGGCT AGACGCTTCG AACTCCCAGT TATTTTACAT AGCCGAAAAG CGCACAATCG CCTTATTCAA ATGGTTAAAG CGGCGAAGCT CCCTCGGGGA GGTGTGCTAC ATGCTTTCTC TGGGAGTTAT CAGCAAGCAA TGGAGTGGGT CAAATTAGGT TTTTTTATCG GTGTAGGAGG AACCATCACC TACCCAAGAG CGAAAAAAAC GCGCGACGCA ATTCAAAAAT TACCACTCAA ACATCTCGTG ATCGAAACAG ATGCACCGGA TATGCCTATA CTTGGATATC AAGGGGAGTC GAATCACCCA GCCAAACTCA TTCACGTCTT TAATGAGCTC GTAGAGTTGC ATAACGGCTC AAAGCAATCG ATTGCCTCTC AGTTATGGAA AAATAGCAAT TTTGCTTTCT TGATATGTGA ATAA
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Protein sequence | MKLFDTHCHF DFDVFQGDFA HQLQLAQTQG VTRILIPSVG PQNWARIQTL ADQHANLYYA LGFHPYFLED NVEQHVAELE HYLKQNVPQC VAIGECGLDF AIDVDPQLQE KTLEVQFELA RRFELPVILH SRKAHNRLIQ MVKAAKLPRG GVLHAFSGSY QQAMEWVKLG FFIGVGGTIT YPRAKKTRDA IQKLPLKHLV IETDAPDMPI LGYQGESNHP AKLIHVFNEL VELHNGSKQS IASQLWKNSN FAFLICE
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