| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002591 |
|---|
| Symbol | |
|---|
| ID | 8556317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1094812 |
|---|
| End bp | 1096107 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646405680 |
|---|
| Product | glutamate-1-semialdehyde aminotransferase |
|---|
| Protein accession | YP_003285218 |
|---|
| Protein GI | 262393364 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00474755 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAAT CATCAGAGCT GTATCAAAAA GCTCAGCAAA CCATCCCTGG CGGTGTCAAT
TCACCAGTTC GTGCATTCAA CGGCGTTGGC GGCTCTCCGC TATTTATCGA ACGAGCAGAC
GGTCCACTGA TTTTTGATGC CGATGGTAAA GCGTACATTG ATTACGTTGG CTCTTGGGGT
CCAATGATTC TTGGCCACAA CCACGCGGTT ATCCGCGAAG CCGTCATTGA CGCAGCACAA
CGTGGCCTCA GCTTCGGTGC GCCAACAGAA CTTGAAATCG CGATGGCAGA GTTAGTGTCT
GAACTTGTTC CATCAATGGA GCAAATTCGC ATGGTAAGTT CTGGTACAGA AGCGACTATG
AGCGCGATTC GCCTTGCACG TGGCTTCACT GGTCGCGACA AGATCATGAA GTTTGAAGGT
TGTTACCATG GTCACGCAGA CAGCTTGCTA GTCAAAGCGG GCTCTGGTGC ACTGACCCTT
GGTCAACCTA GCTCTCCTGG CGTTCCTGCA GATTTTGCTA AGCACACGCT AACAGCAACA
TTCAACGACC TAGATTCTGT ACGCGAGCTA TTCGCTGCTA ACAAAGGCGA AATCGCTTGT
ATCATCGTTG AGCCAGTTGC AGGCAACATG AACTGTATTC CACCAGTGGA AGGCTTCCAC
GAAGGTCTAC GTGAAATCTG TGATCAAGAA GGCGCGCTAC TAATTTTTGA TGAAGTTATG
ACAGGCTTCC GTGTGGCACT TGGTGGCGCA CAAGCGCACT ACAACATCAA GCCAGACCTA
ACGACACTGG GTAAAGTGAT CGGTGGTGGT ATGCCAGTGG GTGCTTTCGG TGGTCGTAAA
GAAGTAATGC AATACGTTGC GCCAACGGGT CCGGTTTACC AAGCGGGTAC GCTTTCTGGC
AACCCTGTCG CAATGGCTGC AGGCTATGCA TGTTTGAACC TTCTTAAAGA AGAAGGCAAC
GAAAAACGCC TAGCTTCAAA AACCAAACAA CTAGCAGATG GCTTTAAGTC TCTAGCAGAG
AAACACGGTA TTCCTCTGGT TGTGAACCAA GTGGGCGGCA TGTTCGGCTT CTTCTTCACT
GACCAAGAAA AAGTGACTTG CTACGAAGAC GTAACGAAGT GCGATGTGGA ACGCTTCAAG
CGCTTCTTCC ACTTAATGCT CAAACACGGT GTCTACCTAG CGCCTTCAGC GTTCGAAGCG
AGCTTTACTT CCCTTGCTCA CGGTTCAAAA GAAATCGATG CCACGCTAGA AGCGGCTGAC
CGCTGTTTTG CAACTCTTGC AGAAGAAGCA AAATAA
|
|---|
| Protein sequence | MTKSSELYQK AQQTIPGGVN SPVRAFNGVG GSPLFIERAD GPLIFDADGK AYIDYVGSWG
PMILGHNHAV IREAVIDAAQ RGLSFGAPTE LEIAMAELVS ELVPSMEQIR MVSSGTEATM
SAIRLARGFT GRDKIMKFEG CYHGHADSLL VKAGSGALTL GQPSSPGVPA DFAKHTLTAT
FNDLDSVREL FAANKGEIAC IIVEPVAGNM NCIPPVEGFH EGLREICDQE GALLIFDEVM
TGFRVALGGA QAHYNIKPDL TTLGKVIGGG MPVGAFGGRK EVMQYVAPTG PVYQAGTLSG
NPVAMAAGYA CLNLLKEEGN EKRLASKTKQ LADGFKSLAE KHGIPLVVNQ VGGMFGFFFT
DQEKVTCYED VTKCDVERFK RFFHLMLKHG VYLAPSAFEA SFTSLAHGSK EIDATLEAAD
RCFATLAEEA K
|
|---|
| |