Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002535 |
Symbol | |
ID | 8556261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1023897 |
End bp | 1025279 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646405624 |
Product | signal recognition particle subunit Ffh SRP54 |
Protein accession | YP_003285162 |
Protein GI | 262393308 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.600573 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGAGA ATTTAACGGA TCGATTATCC AAAACGCTGA AAAATATCAG TGGCAAAGGT CGTCTGACCG AAGACAACAT TAAAGAGACC CTACGTGAAG TACGAATGGC CTTACTTGAA GCTGACGTTG CGCTTCCGGT TGTTCGTGAA TTTGTTAACC GCGTTAAAGA AAAAGCGGTA GGTGTAGAAG TTTCTAAATC TCTGACTCCA GGTCAGGAAT TTATCAAGAT CGTTCAAACA GAACTTGAAG CCGTAATGGG TGAGTCGAAT GAGGCGCTAA ACCTTGCCGC TCAACCACCT GCTGTGCTTC TTATGGCGGG TCTACAAGGT GCGGGTAAAA CCACATCGGT AGGTAAGCTA TCTAAGCTTT TAAAAGAACG TGACAAGAAG AAAGTCTTGG TTGTGTCTGC CGACGTTTAC CGCCCTGCGG CAATCAAGCA GCTTGAAACG CTGGCATCAG ACATCGGTGT TGACTTCTTC CCTTCATCAC CAGATCAGAA GCCTATTGAT ATCGCCAATG CAGCGATTGA CCATGCGAAG AAAAAATTCT ACGACGTATT GATTGTCGAT ACCGCAGGTC GCTTGGCGAT TGATGAAGAG ATGATGGGGG AGATCAAAGA TCTTCACGCA GCTATCAACC CAGTAGAAAC GCTATTTGTT GTTGACGCTA TGACGGGTCA AGATGCAGCA AATACAGCAA AAGCCTTTGG CGATGCGCTA CCTCTTACTG GTGTGGTTCT AACTAAAGTT GATGGTGATG CTCGTGGTGG TGCGGCACTG TCAGTACGCC ATGTAACGGG CAAACCAATC AAATTCTTGG GTGTCGGTGA AAAAACTGAC GCGCTAGAAC CGTTCCATCC AGATCGTGTT GCTTCACGTA TTCTTGGTAT GGGTGACGTT CTGTCTTTAA TTGAAGACCT ACAACGCAAC GTTGACCAAG AAAAAGCAGA AAAGCTGGCG AAGAAGTTCA AAGAGAAGAA AGGTTTCGAC CTTGAAGATT TCCGTGAACA GCTAGGCCAG ATGCAAAACA TGGGCGGCAT GATGGGCATG ATGGATAAGC TTCCTGGCAT GTCTCAGCTA CCAGACAATG TGAAAGACAA AGTCGATGAC AAGATGTTCA AACAGATGGA AGCGATCATC AGCTCCATGA CAATGAAAGA ACGTCAACGC CCAGAGATTA TCAAAGGCTC GCGCAAGAAG CGTATTGCGG CTGGTTCTGG TGTGCAGGTT CAAGACGTAA ACCGCTTACT AAAACAGTTC ACCCAAATGC AGAAGATGAT GAAAAAGATG CAAAAAGGTG GCATGAAAGG CATGATGCGC AACATGCAAG GCATGATGGG CGGCATGGGT GGAGGCGGTG GCTTTAACCC ATTTGGTCGT TAA
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Protein sequence | MFENLTDRLS KTLKNISGKG RLTEDNIKET LREVRMALLE ADVALPVVRE FVNRVKEKAV GVEVSKSLTP GQEFIKIVQT ELEAVMGESN EALNLAAQPP AVLLMAGLQG AGKTTSVGKL SKLLKERDKK KVLVVSADVY RPAAIKQLET LASDIGVDFF PSSPDQKPID IANAAIDHAK KKFYDVLIVD TAGRLAIDEE MMGEIKDLHA AINPVETLFV VDAMTGQDAA NTAKAFGDAL PLTGVVLTKV DGDARGGAAL SVRHVTGKPI KFLGVGEKTD ALEPFHPDRV ASRILGMGDV LSLIEDLQRN VDQEKAEKLA KKFKEKKGFD LEDFREQLGQ MQNMGGMMGM MDKLPGMSQL PDNVKDKVDD KMFKQMEAII SSMTMKERQR PEIIKGSRKK RIAAGSGVQV QDVNRLLKQF TQMQKMMKKM QKGGMKGMMR NMQGMMGGMG GGGGFNPFGR
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