| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002515 |
|---|
| Symbol | |
|---|
| ID | 8556231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 997220 |
|---|
| End bp | 998143 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 646405594 |
|---|
| Product | membrane protein |
|---|
| Protein accession | YP_003285142 |
|---|
| Protein GI | 262393288 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAAGT TATTACGTCA TATTGGTATT AGCTTTGTGT TTGCTGCAGG ACTAGTTGGT
TGTGCAGCGC ATTCTCCTGC ACCTGTCTCT AGCTTAAAGA AAGACTATTC AAGCCTTGAA
AGAGGAAGTT ACAGGGGGAG TTATTATGAG GTAAAAAAAG GCGATACACT TTACTTCATA
GCTTATGTCA CAGATAAAGA TGTAAATGAT CTTGTCCGTT ACAATGAGTT AACTCAGCCT
TACACCATCT ACCCTGGACA GAGGCTAAAA CTTTGGGCTC CGAAATATGT CGCCCCTAAA
TATGGCCAAA AAGTTGAACC CGTTGTGGTT CCTGTTGTTA CGACGCCACC AGCCCCAGTG
ACGAAAACAT CAACAGCCTC TAAACCGAAA ACTTCAAGTA AAAACTCTAG TCAAAAACCT
ACAGAGACTA AGCCTAAAGT CGTACAAAAA CAGCCTCCAA AGAAGGTTGA ACAATCGAAA
ACAAAGGAGT ATGTTGGTTC AAAAGATAAC CAAAAAGTGA AGCAAAAAGC GCCAGTTACC
ACGGCGAAGA GTGATAAAGT TTCTAAGTGG TTGTGGCCAA CAAAAGGGAG AGTAATCAAG
AACTTTTCGG CGGGAGAACA GGGAAATAAA GGTATCGACA TCGCAGGACA GCGTGGTCAA
CCTATCGTTT CAACCGCAGC CGGCACCGTT GTTTATTCAG GCAATGCGCT ACGAGGTTAT
GGCAACTTAA TTATAGTAAA GCATAACGAC AATTATTTAA GCGCCTATGC ACATAATGAC
AAACTGCTGG TATCAGAAGG ACAAAGTGTA AAAAGCGGAC AGAAAATCGC CACCATGGGT
AGTTCAGGTG CAAAATCAGT CAAGCTACAC TTTGAAATTC GCTATCAAGG TAAATCGGTG
AATCCAAAAC GCTATTTGCC TTAA
|
|---|
| Protein sequence | MSKLLRHIGI SFVFAAGLVG CAAHSPAPVS SLKKDYSSLE RGSYRGSYYE VKKGDTLYFI
AYVTDKDVND LVRYNELTQP YTIYPGQRLK LWAPKYVAPK YGQKVEPVVV PVVTTPPAPV
TKTSTASKPK TSSKNSSQKP TETKPKVVQK QPPKKVEQSK TKEYVGSKDN QKVKQKAPVT
TAKSDKVSKW LWPTKGRVIK NFSAGEQGNK GIDIAGQRGQ PIVSTAAGTV VYSGNALRGY
GNLIIVKHND NYLSAYAHND KLLVSEGQSV KSGQKIATMG SSGAKSVKLH FEIRYQGKSV
NPKRYLP
|
|---|
| |