Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002497 |
Symbol | |
ID | 8556213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 978207 |
End bp | 978884 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405576 |
Product | ribonuclease III |
Protein accession | YP_003285124 |
Protein GI | 262393270 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.186598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCTC CAATTGATAA ACTAGAGAGA AAGCTCGGCT ACCAGTTTCA AGATGCCGGG CTTATCAACT TGGCGCTGAC TCACCGCAGC GCCAACAGTA AGCATAATGA ACGTCTTGAG TTTCTGGGCG ATTCAATTTT AAGTTTTGTC ATCGCTGATG ATCTGTACCA TCGTTTCCCG AAAGTGAACG AGGGTGACAT GAGCCGTATG CGTGCTACTT TGGTTCGCGG ACATACATTG GCGGAACTGG GTCGTGAATT CGATCTAGGA GATTATTTAA AATTAGGTCC AGGTGAATTG AAGAGTGGCG GTTTCCGCCG AGACTCTATT TTAGCCGATG CGGTTGAAGC CATTATTGGC GCAATTTACC TAGACAGCGA TCTTGAAGTC GTGCGAGGCA TTGTATTGAG TTGGTACAAC TCACGCCTTG AAGCCATTAA ACCTGGCGTC TCACAAAAAG ATCCGAAAAC TCGCCTACAA GAGTTCCTAC AAGGCAGAAG AAAACCGCTG CCTGTGTACA CAGTGACTAA TATTAAAGGT GAAGCGCACA ACCAAGAGTT TACGGTTGAG TGTGAAGTAG CAGGTGTGGA CAAGCCTGTA ATCGGGAAAG GCACCAGCCG CCGCAAGGCA GAACAAGCGG CTGCTGAAAC AGCACTTGAG CAATTAACAA ATGGCTGA
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Protein sequence | MNSPIDKLER KLGYQFQDAG LINLALTHRS ANSKHNERLE FLGDSILSFV IADDLYHRFP KVNEGDMSRM RATLVRGHTL AELGREFDLG DYLKLGPGEL KSGGFRRDSI LADAVEAIIG AIYLDSDLEV VRGIVLSWYN SRLEAIKPGV SQKDPKTRLQ EFLQGRRKPL PVYTVTNIKG EAHNQEFTVE CEVAGVDKPV IGKGTSRRKA EQAAAETALE QLTNG
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