Gene VEA_002460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002460 
Symbol 
ID8556176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp940201 
End bp940626 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content47% 
IMG OID646405539 
Productputative Holliday junction resolvase 
Protein accessionYP_003285087 
Protein GI262393233 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACGCA CAATTATGGC TTTTGACTTT GGAACCAAAA GCATTGGTAG CGCTATTGGC 
CAAGAAATTA CTGGTACGGC TTCCCCATTA AAAGCCTTTA AAGCCAATGA CGGTATTCCA 
AATTGGGACG ATATCGAAAA GCAAATCAAA GAGTGGCAGC CAGATTTGCT AGTGGTCGGT 
TTACCAACTG ATCTTCATGG CAAAGACCTT GAGACCATAA CCCCTCGTGC ACGAAAATTT 
GCTAAGCGTC TGCAAGGCCG ATACGGCTTA CCTGTTGAAC TGCATGATGA GCGATTATCT 
ACAGCAGAAG CTCGTGCGGA GTTGTTCAGC ATGGGCGGCT ACAAAGCCCT ATCGAAAGGG 
AATGTGGACT GCCAGTCAGC GGTGGTGATT CTAGAAAGCT GGTTTGAAGC CCTCTGGGGT 
GAATAA
 
Protein sequence
MSRTIMAFDF GTKSIGSAIG QEITGTASPL KAFKANDGIP NWDDIEKQIK EWQPDLLVVG 
LPTDLHGKDL ETITPRARKF AKRLQGRYGL PVELHDERLS TAEARAELFS MGGYKALSKG 
NVDCQSAVVI LESWFEALWG E