Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002410 |
Symbol | |
ID | 8556105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 883340 |
End bp | 884131 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405468 |
Product | uncharacterized ABC transporter permease component YrbE |
Protein accession | YP_003285037 |
Protein GI | 262393183 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGATA ACTTTATGCA TTTTGTCGCC TCACTAGGTA GACGAACGCT CTCCATCTGC GGAGCATTTG GTCGTGCGAC TTTCATGCTG ATTGGGGCAC TGTTTACTAA GCCACAACCG CTCAAAAGCT TTCCTCTGCT CGTTAAACAA CTTTATTCCG TAGGCGTCCA GTCTCTGGCG ATTATCGTCG TATCTGGGTT GTTCATTGGT ATGGTCTTGA GCCTACAAGG CTATGTTGTG CTGGTGGATT ACGGCGCAGA GGGCAGTTTG GGGCAAATGG TGGCGCTCTC ATTGCTACGT GAATTAGGGC CCGTTGTCAC TGCACTTCTG TTTGCTGGTC GTGCAGGCTC TGCGTTAACT GCAGAGATAG GTTTGATGAA AGCGACGGAG CAACTTTCTA GCCTTGAAAT GATGGCGGTA GATCCGCTGA AAAGAGTGAT CGCGCCACGT TTTTGGGCTG GTGCTATTTC AATGCCATTA CTGGCTATGA TTTTCATGGC AGTGGGTATT TGGGGCGCTC AGCTTGTTGG TGTTGACTGG AAAGGTGTTG ACCATGGCAG TTTTTGGTCA GCGATGCAGT CCTCAGTTGA ACTAGGACAG GATATTGGTA ACAGTATGAT CAAATGCTTT GCGTTTGCAA TTACGGTTAC TTGGGTCGCT CTATTTAACG GTTATGATGC TATTCCAACT TCGGAAGGGA TCAGCCGAGC AACTACGCGC ACTGTTGTGC ATTCTTCTTT AGCAGTACTA GGACTAGACT TTGTACTGAC CGCATTGATG TTTGGGAATT AA
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Protein sequence | MVDNFMHFVA SLGRRTLSIC GAFGRATFML IGALFTKPQP LKSFPLLVKQ LYSVGVQSLA IIVVSGLFIG MVLSLQGYVV LVDYGAEGSL GQMVALSLLR ELGPVVTALL FAGRAGSALT AEIGLMKATE QLSSLEMMAV DPLKRVIAPR FWAGAISMPL LAMIFMAVGI WGAQLVGVDW KGVDHGSFWS AMQSSVELGQ DIGNSMIKCF AFAITVTWVA LFNGYDAIPT SEGISRATTR TVVHSSLAVL GLDFVLTALM FGN
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