Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002397 |
Symbol | |
ID | 8556092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 872005 |
End bp | 873348 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646405455 |
Product | PmbA protein |
Protein accession | YP_003285024 |
Protein GI | 262393170 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATTA AACAGCAGGT TGCTGAGCAA CGTACCGAGC TAGAGCAAGC CGTCGCAAGA GCCTTAAAGC TTGCATCGGC AAAATCTGAC GCCGCCGAAG TCGCAATTAC CAAAAGCACT GGTTTAAGTG TATCTACTCG CATGGGCGAG GTAGAAAATG TCGAGTTCAA CAGCGATGGT GCGCTGGGCA TTACCGTTTA CCGAGGTCAA CGTAAAGGCA GTGCTTCCAC GTCTGATTTA AGTGAAGCTG CTATCGAGCA AACCGTTATT GCGGCGCTGG ATATTGCGCA TTACACATCT GAAGATCCAT TTGCAGGGCC CGCAGCCAAA GAATACATGG TGCAAGAGAT CCCTGAGCTT GATCTTTTCC ACCCAGACGC CCCTGATCCC GATTATGCTG CCGATGTGGC GATCGCCGCT GAGAAAGAAG CGTTAAGTTA TAACAGTGCA ATCAAGCAAA GTGATGGCGC GAGTTATGAT AGCCACTACG GTGTAAAAGT GTATGGTAAC AGCCATGGCT TATTAGCAAG CTATGCGTCT AGCCGCCACA GTACCAGCTG TTGTGTGATT GGCGTTGGTC AAAATGGCGA AATGGAGCGT GATTACAGCT ACACAGTGGC ACGTCATCGC GATGACTTAT GGACACCAGA AACAGTGGGT CGTAAGGCGG CAGAGAATAC GATTAACCGC TTAGATGCGC AGCGCTTAAA GACAGGTAAA TACCCAATCA TGTTTGCCGC TGATGTTGCA ACTGGCTTGA TTGGCCATCT CGTTATGGCG ATCAGCGGTG GTAACCTGTA CCGAAAATCT TCTTTCTTAC TTGACCATCT AGGCAAACAA GTGCTTCCTG AATGGTTCAA TATCTCAGAA CGTCCGCATG TATTGCGTGG TTTGGCGTCA AGCCCATTCG ATAGCGAAGG CGTATATACT CAAGACCGTG AGATCATTAC TGACGGTGTG CTAGCAACTT ATCTGTTAAC CAGTTATGCC GCACGTAAAA TGAAGATGGC GCCGACAGGT CACGCTGGTG GCATCCATAA CTGGTACGTG AAATCGACGG GTCAAAACTT CGAACAAATG CTTAAAGAGC TCGGCACTGG TTTGTTAGTG ACAGAAGTGA TGGGGCAAGG CGTGAACGTG GTAACAGGTG ATTACTCTCG CGGTGCTGCA GGCTTCTGGG TTGAGAACGG TGAAATCCAA TACCCAGTAT CGGAAATTAC CATCGCTGGT AATCTGAAGG ACATGTTCAA TAAGATTGTT GCCGTAGGTA GCGACGTTGA AACGCGCTCG CAAATTCAAA CGGGTTCAAT CTTACTGGAT GCGATGAAAG TTGCAGGTGA GTAA
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Protein sequence | MDIKQQVAEQ RTELEQAVAR ALKLASAKSD AAEVAITKST GLSVSTRMGE VENVEFNSDG ALGITVYRGQ RKGSASTSDL SEAAIEQTVI AALDIAHYTS EDPFAGPAAK EYMVQEIPEL DLFHPDAPDP DYAADVAIAA EKEALSYNSA IKQSDGASYD SHYGVKVYGN SHGLLASYAS SRHSTSCCVI GVGQNGEMER DYSYTVARHR DDLWTPETVG RKAAENTINR LDAQRLKTGK YPIMFAADVA TGLIGHLVMA ISGGNLYRKS SFLLDHLGKQ VLPEWFNISE RPHVLRGLAS SPFDSEGVYT QDREIITDGV LATYLLTSYA ARKMKMAPTG HAGGIHNWYV KSTGQNFEQM LKELGTGLLV TEVMGQGVNV VTGDYSRGAA GFWVENGEIQ YPVSEITIAG NLKDMFNKIV AVGSDVETRS QIQTGSILLD AMKVAGE
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