| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002346 |
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| Symbol | |
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| ID | 8556031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 797508 |
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| End bp | 798455 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405394 |
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| Product | tRNA dihydrouridine synthase A |
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| Protein accession | YP_003284973 |
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| Protein GI | 262393119 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGATT GGACCGATCG TCATTGTCGC TACTTCCATC GCTTAATGAC CAAAGAAACC
CTGCTGTACA CTGAAATGGT GACGACAGGT GCGATCATTC ATGGAAAAGG AGATTTCCTC
GCTTACAACG AAGAAGAGCA TCCGTTGGCC CTTCAGTTGG GTGGTTCAAA CCCAGAAGAC
TTGGCAAAGT GTGCCAAACT GGCTCAAGAG CGTGGCTACG ATGAGGTTAA CCTCAATGTG
GGTTGCCCGT CTGACCGTGT ACAAAACGGT CGCTTTGGTG CTTGCCTAAT GGCGGAACCA
CAGTTGGTTG CGGATTGTGT CGCTGCAATG AAGGGTGTGG TTGATATTCC TGTGACAGTC
AAGACTCGTA TTGGTATTGA TGATCAAGAT TCTTACGAGT TCCTAACGGA TTTTGTTTCT
ATTGTCTCAG AAAAGGGGGG CTGTGAGCAG TTCACTATCC ACGCGCGTAA AGCTTGGTTA
AGTGGTCTTA GTCCGAAAGA AAACCGTGAG ATCCCACCAT TGGATTACCC ACGAGCTTAC
CAATTGAAGC AAGATTTTTC TCACTTAACC ATTGCTATTA ACGGTGGTGT AAAGTCACTA
GAAGAAGCCA AAGCACATCT TCAGCATCTT GATGGTGTGA TGATTGGTCG TGAGGCTTAC
CAAAGCCCAT ATCTACTGGC ATCGGTAGAT CAAGAGTTAT TTGGCTCTAA TGCTCCAGTG
AAGAAACGCA GCGAAATTGT TGAAGAAATG TACCCATACA TTGAAGCGCA ATTAGCGAAA
GGTGCGTACC TTGGTCATAT TACCCGTCAT ATGTTAGGTT TATTCCAAAG CATGCCCGGT
GCTCGTCAAT GGCGTCGTCA TATCAGTGAA AATGCGCACA AGCCGGGTTC TGGTTTAGAA
GTGCTGCAAG ACGCGTTAGC GAAGATTCCA AAAGAATTGA ATGTGTAA
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| Protein sequence | MLDWTDRHCR YFHRLMTKET LLYTEMVTTG AIIHGKGDFL AYNEEEHPLA LQLGGSNPED
LAKCAKLAQE RGYDEVNLNV GCPSDRVQNG RFGACLMAEP QLVADCVAAM KGVVDIPVTV
KTRIGIDDQD SYEFLTDFVS IVSEKGGCEQ FTIHARKAWL SGLSPKENRE IPPLDYPRAY
QLKQDFSHLT IAINGGVKSL EEAKAHLQHL DGVMIGREAY QSPYLLASVD QELFGSNAPV
KKRSEIVEEM YPYIEAQLAK GAYLGHITRH MLGLFQSMPG ARQWRRHISE NAHKPGSGLE
VLQDALAKIP KELNV
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