Gene VEA_002331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002331 
Symbol 
ID8556016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp787795 
End bp788466 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content47% 
IMG OID646405379 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_003284958 
Protein GI262393104 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.556001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGATT TTCTTATTGC TCCATCCATT TTATCGGCAG ATTTTGCTCG TCTCGGTGAA 
GATGTCGAGA AAGTACTCGC AGCGGGTGCG GATGTGGTAC ATTTCGACGT TATGGATAAC 
CACTATGTAC CAAACCTGAC TTTTGGTGCA CCTGTGTGTA AAGCACTACG CGATTACGGC 
ATCACAGCGC CAATCGATGT TCACCTAATG GTGAAACCGG TTGACCGCAT TATTCCTGAT 
TTCGCAAAAG CGGGTGCGTC GATGATTACA TTCCATGTGG AAGCTTCCGA TCATGTAGAC 
CGTACACTGC AGTTAATTAA AGAGCACGGC TGTCAGGCTG GTGTGGTACT AAACCCAGCA 
ACGCCACTTG CGAGCCTTGA GTTCATCATG GACAAAGTCG ACATGATTCT ACTGATGTCG 
GTTAATCCTG GCTTTGGTGG TCAATCATTC ATTCCTCACA CACTAGATAA ACTGCGTGCA 
GTTCGTAAGA TGATCGATGA GTCTGGTCGC GATATCCGTT TAGAAATTGA TGGCGGTGTG 
AAGGTTGACA ACATTCGTGA AATCGCAGAA GCGGGCGCAG ATATGTTTGT TGCAGGCTCG 
GCGATTTTCG GTCAGCCAGA TTACAAACAA GTGATCGACC AAATGCGCAC GGAACTGGCT 
GAAGTAAAAT AA
 
Protein sequence
MKDFLIAPSI LSADFARLGE DVEKVLAAGA DVVHFDVMDN HYVPNLTFGA PVCKALRDYG 
ITAPIDVHLM VKPVDRIIPD FAKAGASMIT FHVEASDHVD RTLQLIKEHG CQAGVVLNPA 
TPLASLEFIM DKVDMILLMS VNPGFGGQSF IPHTLDKLRA VRKMIDESGR DIRLEIDGGV 
KVDNIREIAE AGADMFVAGS AIFGQPDYKQ VIDQMRTELA EVK