| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002328 |
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| Symbol | |
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| ID | 8556013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 784126 |
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| End bp | 785226 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405376 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_003284955 |
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| Protein GI | 262393101 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000221553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACGGA TTACGGTCAA CCTAGCTGAG CGTAGCTACC CAATCTCTAT TGGCGCCGGG
TTATTTGAGG ACCCGGCGTA CCTCTCTCAA GTTCTCTCAA ACAAAAATGC AAAACAAAAA
GTTGTTGTGA TCAGTAATGT CACAGTGGCG CCTTTGTATG CAGACAAAAT TTTAAAGCAA
CTCGAGCAGC TCGGTTGTAG TGCATCCTTG TTAGAATTGC CTGACGGCGA ACAGTACAAA
AACTTGGATG TGTTTAACCA AGTGATGAAC TTCCTCCTCG AGGGGAATTA CGCTCGTGAT
GTTGTGATCA TCGCGTTAGG TGGTGGCGTT ATTGGCGACC TTGTGGGTTT TGCTTCTGCC
TGTTACCAGC GTGGGGTCGA CTTTATTCAA ATACCAACGA CATTACTATC TCAAGTGGAC
TCTTCGGTGG GTGGAAAAAC CGCGGTTAAC CATCCGTTGG GTAAGAACAT GATAGGTGCG
TTTTACCAAC CTAAAGCCGT GATCATCGAT ACCAACTGTT TATCGACGTT GCCTGAGCGT
GAATTCGCAG CAGGTATCGC AGAAGTCATT AAGTACGGCA TCATTTACGA TGTAGACTTT
TTTGTATGGT TGGAAGAAAA CCTTGAACGC TTGTACGCGT TGGATGAAGA AGCGCTAACT
TATGCCATTG CACGTTGCTG TGAAATAAAA GCGGAAGTGG TGGCTCAGGA TGAGAAAGAA
TCGGGCATCC GCGCTCTGCT CAACTTAGGT CACACCTTTG GTCATGCGAT TGAAGCTGAG
CTTGGCTACG GCAATTGGCT GCATGGTGAA GCGGTTTCTG CTGGCACGGT TATGGCGGCC
AAAACTTCGC ATCTGCGCGG TCTTATCTCA GCAGAGCAAT TTGAGCGTAT TGTTGCGATT
TTGCGTCGTG CCAAACTGCC TGTTCATACT CCAGAAAGTA TGAGCTTCGA TGACTTCCTC
AAACATATGA TGCGAGATAA AAAAGTCCTC TCTGGTCAAT TAAGATTAGT TCTACCTACA
GGCATTGGTA GTGCCGAGGT CATTGCTGAT ACGACACAAG ACGTACTCAA ACAGGCGATA
GACTTCGGTC GCGATATTTA A
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| Protein sequence | MERITVNLAE RSYPISIGAG LFEDPAYLSQ VLSNKNAKQK VVVISNVTVA PLYADKILKQ
LEQLGCSASL LELPDGEQYK NLDVFNQVMN FLLEGNYARD VVIIALGGGV IGDLVGFASA
CYQRGVDFIQ IPTTLLSQVD SSVGGKTAVN HPLGKNMIGA FYQPKAVIID TNCLSTLPER
EFAAGIAEVI KYGIIYDVDF FVWLEENLER LYALDEEALT YAIARCCEIK AEVVAQDEKE
SGIRALLNLG HTFGHAIEAE LGYGNWLHGE AVSAGTVMAA KTSHLRGLIS AEQFERIVAI
LRRAKLPVHT PESMSFDDFL KHMMRDKKVL SGQLRLVLPT GIGSAEVIAD TTQDVLKQAI
DFGRDI
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