Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002320 |
Symbol | |
ID | 8556005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 775279 |
End bp | 776190 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405368 |
Product | Transcriptional regulator, LysR family |
Protein accession | YP_003284947 |
Protein GI | 262393093 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.726256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTC GAGATTTTGA GTACTTAGTT GCACTTGCGG AACATAAGCA CTTTCGCAAA GCGGCAGAAG CATGTTTTGT TAGCCAACCA ACATTGAGTG GACAAATTCG TAAGCTAGAG GATGAACTCG GTACCACGCT TTTAGAGCGA AGCAGCCGTC GCGTTTTGTT TACCGATTCA GGGTTGCAGT TGGTGGAGCA AGCTAAGCGT ATCTTAAGTG AAGTGAAAAC TTTTAAAGAT ATGGCGAGTG GTCAGAGCGG AGCAATGACT GGGCCTATGC ATATCGGTTT CATCCCGACG GTAGGTCCGT ATCTACTACC CAAAATTCTG CCGCAGATAA AAGAAGCATT TCCTGAACTG GAGCTGTTCC TGCACGAAGC TCAAACACAT CAGTTGGTGC GTCAATTAGA AGAAGGTAAA TTGGACTGCT TGGTCTTGGC TTCGGTTGAT GAAACGGCAC CTTTTAAAGA AATCGAAGTG TATAACGAGC CGTTAAGCGT TGCGGTGCCA TGTGATCATG AGTGGGCCTC TCTCGACCAT GTTGATATGT TGGAGTTGAA TGGTAAAACC GTTTTAGCGC TAGGAGACGG TCACTGTCTT CGTGATCAAG CGTTAGGTTT CTGTTTTGCT GCCGGAGCGA AAGACGATGA ACGCTTTAAG GCAACCAGTT TGGAGACACT GCGGAATATG GTCGCTGCTG GTGCTGGGAT TACGTTATTG CCTCAGCTTT CTATCCCCAA TGAGAAGCAA AAAGATGGCG TGTGCTATGT ACCAGCCGTT AACCCTACGC CTTCGCGCAA TATAGTCCTT GTATATCGCC CGGGCTCACC ACTGCGTGCA AGGTTTGAAG CTTTGGCGGC GAAGATTAAA GAAGTATTGG CTTCTTATCC TTCATTGAAC GCCGCGGCGT AA
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Protein sequence | MNIRDFEYLV ALAEHKHFRK AAEACFVSQP TLSGQIRKLE DELGTTLLER SSRRVLFTDS GLQLVEQAKR ILSEVKTFKD MASGQSGAMT GPMHIGFIPT VGPYLLPKIL PQIKEAFPEL ELFLHEAQTH QLVRQLEEGK LDCLVLASVD ETAPFKEIEV YNEPLSVAVP CDHEWASLDH VDMLELNGKT VLALGDGHCL RDQALGFCFA AGAKDDERFK ATSLETLRNM VAAGAGITLL PQLSIPNEKQ KDGVCYVPAV NPTPSRNIVL VYRPGSPLRA RFEALAAKIK EVLASYPSLN AAA
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