Gene VEA_002315 details

Gene Information

• Locus tag: VEA_002315
• ID: 8556000
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 769974
• End bp: 771848
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646405363
• Product: argininosuccinate lyase/N-acetylglutamate synthase
• Protein accession: YP_003284942
• Protein GI: 262393088
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0165] Argininosuccinate lyase; [COG1246] N-acetylglutamate synthase and related acetyltransferases
• TIGRFAM ID: [TIGR00838] argininosuccinate lyase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.784515
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATTAT GGGGCGGAAG ATTTACCCAA GCGGCAGACA CTAGATTTAA AGAGTTTAAC 
GATTCGTTGC GTTTTGACTA CCGATTGGCT GAGCAAGACA TCGTAGGTTC AATCGCATGG 
TCTAAAGCTC TGCTTTCTGT AGATGTTCTA TCGGCAGAAG AACAGCAAAA GCTGGAACTT 
GCTTTAAACG AGCTGAAGTT AGAAGTGATG GAAGATCCTC ATCAAATTCT TCGTTCAGAT 
GCAGAAGATA TCCACTCTTG GGTTGAACAG CAGCTGATTA GTAAAGTGGG AGATTTAGGT 
AAAAAGCTCC ACACTGGGCG TTCTCGTAAT GACCAAGTAG CGACAGACCT AAAACTTTGG 
TGTCGTCAGC AAGGCCAGCA ACTGTTGATT GCTTTAGATC GTCTGCAAGC ACAAATGGTT 
CATGTTGCTA AGCAGCACCA AGGCACTGTA TTGCCTGGCT ATACTCATCT TCAGCGCGCT 
CAACCTGTCA CCTTTGCTCA CTGGTGTTTG GCTTATGTTG AAATGTTCGA GCGTGACTAC 
TCTCGTCTGA ATGATGCCTT ACAGCGTCTC GACACTTGTC CACTTGGCTC GGGTGCTTTA 
GCTGGCACGG CTTATCCGAT TGATCGTGAA CAGTTAGCTC ATAACCTTGG TTTCCACCGC 
GCTACGCGTA ATTCACTCGA TTCGGTTTCG GATCGTGATC ATGTGATGGA ACTGATGTCG 
GTGGCCTCGA TTTCTATGTT GCACCTTTCT CGTCTTGCAG AAGATATGAT CTTCTACAAC 
TCAGGGGAGT CTAACTTTAT TGAGTTAGCG GATACGGTGA CGTCTGGTTC GTCATTAATG 
CCACAGAAGA AAAATCCGGA TGCACTTGAG TTGATCCGTG GTAAGACAGG GCGTGTCTAT 
GGCGCATTAT CGAGCATGAT GATGACAGTG AAAGCCCTAC CATTGGCGTA CAACAAAGAC 
ATGCAAGAAG ATAAAGAAGG GTTGTTTGAT GCGTTAGACA CATGGAATGA TTGCATGGAA 
ATGGCAGCGC TGTGTTTTGA TGGCATTAAA GTAAATGGTG AGCGTACGCT TGAAGCTGCG 
AAGCAAGGGT ATGCGAACGC GACTGAGTTA GCTGATTACT TAGTGGCGAA AGGCATCCCA 
TTCCGTGAGG CGCACCATAT TGTGGGCGTA GCGGTGGTAG GGGCAATTGA TAAAGGCTGT 
GCGCTGGAAG AATTGTCTCT GCAAGAGCTA AAAACCTTCT CTGAGGTGAT TGAAGATGAT 
GTGTATGACA TTCTGACAAT AGAGTCTTGT TTGGAAAAAC GTTGTGCGCT GGGTGGCGTT 
TCGCCTCACC AAGTCGCTTA TGCGGTAGAG CAAGCGGATA AACGTCTGAG CCAGCGTGAC 
AGCTCGGCAG TGAAAGTGCG TCCTGCACGT TTGACGGACA TTGAAACACT AGAGGGCATG 
GTGGCTTATT GGGCGAACCT CGGTGAGAAT CTACCCCGCT CTCGTAATGA GCTCGTGAGA 
GATATTGGCT CCTTCGCGGT GGCAGAGCAT CATGGTGAAG TGACAGGTTG CGCTTCTCTA 
TATGTGTATG ACTCAGGGTT GGCTGAAATA CGCTCTCTTG GTATCGAAGC AGGCTGGCAA 
GGTCAAGGGC AGGGTAGTGC AATCGTAAAT CACTTGGTTG AGAAAGCACG TCAAATGGCG 
ATAAAGAAGG TCTTTGTCCT CACTCGAACG CCAGAGTTCT TTATGAAGCA GAGCTTCTTA 
CCAACATCGA AGTCGCTGTT GCCAGAAAAA GTCTTGAAAG ATTGCGATCA GTGTCCACGT 
CAGCACGCGT GTGATGAAGT GGCGCTAGAG ATCAATTTAA TGGAGCAAGT GATCCAAAAA 
TCGCATGTGG CATGA 

 

Protein sequence

MALWGGRFTQ AADTRFKEFN DSLRFDYRLA EQDIVGSIAW SKALLSVDVL SAEEQQKLEL 
ALNELKLEVM EDPHQILRSD AEDIHSWVEQ QLISKVGDLG KKLHTGRSRN DQVATDLKLW 
CRQQGQQLLI ALDRLQAQMV HVAKQHQGTV LPGYTHLQRA QPVTFAHWCL AYVEMFERDY 
SRLNDALQRL DTCPLGSGAL AGTAYPIDRE QLAHNLGFHR ATRNSLDSVS DRDHVMELMS 
VASISMLHLS RLAEDMIFYN SGESNFIELA DTVTSGSSLM PQKKNPDALE LIRGKTGRVY 
GALSSMMMTV KALPLAYNKD MQEDKEGLFD ALDTWNDCME MAALCFDGIK VNGERTLEAA 
KQGYANATEL ADYLVAKGIP FREAHHIVGV AVVGAIDKGC ALEELSLQEL KTFSEVIEDD 
VYDILTIESC LEKRCALGGV SPHQVAYAVE QADKRLSQRD SSAVKVRPAR LTDIETLEGM 
VAYWANLGEN LPRSRNELVR DIGSFAVAEH HGEVTGCASL YVYDSGLAEI RSLGIEAGWQ 
GQGQGSAIVN HLVEKARQMA IKKVFVLTRT PEFFMKQSFL PTSKSLLPEK VLKDCDQCPR 
QHACDEVALE INLMEQVIQK SHVA