| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002270 |
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| Symbol | |
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| ID | 8555955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 722636 |
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| End bp | 723322 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405319 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_003284898 |
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| Protein GI | 262393044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAC AAGATATTAA ATTGATTGCT TTTGATCTGG ATGGAACACT GCTTGATAGC
GTGCCAGATC TTGCCGTAGC GGCCGATCAA GCAGTTCAGG CGTTAGGCTA TCCTTCTGTA
TCAGAAGAGC AGGTGCGTGA TTACGTTGGT AATGGTGCAG ATATATTGAT TGGACGTGCA
TTAAGCCAAA GCATGACCAT CAGCAGTGAT TTGAGTGATG AGCTGCGTGC TAAAGCGCGT
GAGCTGTTTG ATGAATACTA CAAGCAAAGC GGCCATAAGC TAAGTCACCT TTACCCAACA
GTAAAAGAGA CGCTTGAAGA GCTACACCAA GCTGGTTTTA CGATGGCGAT TGTGACGAAC
AAGCCCTCGA AATTCGTACC AGAAATTCTA GAGCAGCATG ACATCGCCAA GTACTTCGTA
GACGTATTAG GTGGTGACGC GTTTCCAGAT AAAAAACCAA ACCCGGTGGC GCTGAACTGG
CTAATGGAAA AGCACCAGGT AAAACCAGCA GAGATGCTGA TGGTTGGGGA TTCGAAAAAC
GATATCTTGG CGGCGAAAAA TGCGGGTTGT GCTTCATTTG GTTTAACTTA CGGTTATAAC
CACGGCGAGC CCATTTCAGC TTCGAACCCT GACGTAGTGG CGAACCGCCT CGCGGAATTA
CTGGAAGTCG TCGCTGTTTC TGCATAA
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| Protein sequence | MTQQDIKLIA FDLDGTLLDS VPDLAVAADQ AVQALGYPSV SEEQVRDYVG NGADILIGRA
LSQSMTISSD LSDELRAKAR ELFDEYYKQS GHKLSHLYPT VKETLEELHQ AGFTMAIVTN
KPSKFVPEIL EQHDIAKYFV DVLGGDAFPD KKPNPVALNW LMEKHQVKPA EMLMVGDSKN
DILAAKNAGC ASFGLTYGYN HGEPISASNP DVVANRLAEL LEVVAVSA
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