| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002244 |
|---|
| Symbol | |
|---|
| ID | 8555917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 692136 |
|---|
| End bp | 693173 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 646405281 |
|---|
| Product | glycerol-3-phosphate dehydrogenase [NAD(P)+] |
|---|
| Protein accession | YP_003284872 |
|---|
| Protein GI | 262393018 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAG CAAATACAAA CAATGCTTAC GGTAAAGACA TCGCAATGAC GGTGATTGGC
GCAGGTTCAT ACGGTACCTC TCTGGCGATC TCACTCGCTC GTAACGGCGC GAACGTAGTC
CTTTGGGGAC ACGAGCCTGA GCACATGGCA CGTTTAGAAG CGGATCGCGC GAACCACGCT
TTCTTACCTG GTGTTGATTT CCCTGAAAGC TTGATCATTG AATCGGATTT AGAAAAAGCC
GTACAAGCAA GCCGAGATTT ATTGGTTGTG GTTCCAAGCC ATGTTTTTGG CATCGTACTG
AACAGCTGTA AGCCTTTCTT ACGTGAAGAC TCTCGTATCT GCTGGGCAAC CAAAGGTCTT
GAGCCAGAAA CGGGTCGTCT GCTGAAAGAC GTCGCTTATG ACATTATCGG TGAAAACTAC
TCACTGGCTG TATTGTCTGG CCCAACGTTC GCCAAAGAGC TCGCGATGGG CATGCCTACT
GCAATTTCAG TTGCTTCTCC AGATGCTGAA TTTGTCGCTG ACCTACAAGA AAAAATCCAC
TGCAGCAAAA CCTTCCGCGT GTACGCCAAT AGTGACTTTA TCGGCATGCA ATTGGGCGGT
GCGGTGAAAA ACGTTATCGC AATTGGTGCG GGTATGTCTG ACGGCATCGG TTTTGGAGCC
AATGCGCGTA CTGCATTGAT TACTCGTGGT TTGGCCGAAA TGAGTCGTCT TGGTGCTGCG
CTTGGTGCAA AACCAGAAAC CTTCATGGGT ATGGCTGGTT TGGGCGACCT TGTCCTAACG
TGTACCGACA ATCAATCACG CAACCGCCGC TTTGGTTTAG CGCTAGGTCA AGGTAAAGAC
GTCGACACGG CACAAGAAGA AATTGGCCAA GTCGTAGAAG GCTACCGCAA CACGAAAGAA
GTATGGATGC TCTCTCAACG CATGGGTGTT GAGATGCCAA TTGTTGATCA AATTTATCAA
GTATTGTATC AAGGGAAGGA TGCACGCCTG GCAGCGCAAG ATTTACTTGC TCGTGACAAA
AAAGCCGAAG GAAAGTAG
|
|---|
| Protein sequence | MTQANTNNAY GKDIAMTVIG AGSYGTSLAI SLARNGANVV LWGHEPEHMA RLEADRANHA
FLPGVDFPES LIIESDLEKA VQASRDLLVV VPSHVFGIVL NSCKPFLRED SRICWATKGL
EPETGRLLKD VAYDIIGENY SLAVLSGPTF AKELAMGMPT AISVASPDAE FVADLQEKIH
CSKTFRVYAN SDFIGMQLGG AVKNVIAIGA GMSDGIGFGA NARTALITRG LAEMSRLGAA
LGAKPETFMG MAGLGDLVLT CTDNQSRNRR FGLALGQGKD VDTAQEEIGQ VVEGYRNTKE
VWMLSQRMGV EMPIVDQIYQ VLYQGKDARL AAQDLLARDK KAEGK
|
|---|
| |