Gene VEA_002220 details

Gene Information

• Locus tag: VEA_002220
• ID: 8555893
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 667893
• End bp: 668405
• Gene Length: 513 bp
• Protein Length: 170 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646405257
• Product: P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc- resistance associated protein
• Protein accession: YP_003284848
• Protein GI: 262392994
• COG category: [N] Cell motility; [P] Inorganic ion transport and metabolism; [T] Signal transduction mechanisms; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.0000000285493
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCTG CAAAAAAACT TGTGTTAGCT GCTGTTGTTC TACCTCTTAC TCTCGGCGCA 
GCAAGCGCAT TCGCTTACGG TGGTAAAAAC CATCATCAAG GCCCGCGTGA TGAATGTGGC 
ATGGGAATGG ACCGTGGCAT TATGCGTGAT TTGAATTTGA CGGATGCTCA AAAAGATCAG 
CTTAAGTCTT TCCGTGAAGC AAACCGCGCA CAGATGAAAG GCAAATATTC TGAAAATCGC 
GAAGCCCGTA TGGCTGAGCG ACAAGCACAC CACGCAAAAA TGCAGTCACT CTTACTAGCG 
GATAGTTTTG ATGAAGCGCA AGCGACCGCA TTAGCAAAAG AAATGGTTGA ACGCCAAACT 
GAGCACCGTG TGCAAATGCT AGAAAGAAAG CACCAAATGC TGAGCGTATT AACGCCAGAA 
CAAAAAGCAG AGTTTGTGAA GTTGCAAAAT GAACGCATGC AAGAGTGTGG CGACAGAATG 
CATAAGCGCA TGGAAAAATA CCGCAATAAT TAA 

 

Protein sequence

MKSAKKLVLA AVVLPLTLGA ASAFAYGGKN HHQGPRDECG MGMDRGIMRD LNLTDAQKDQ 
LKSFREANRA QMKGKYSENR EARMAERQAH HAKMQSLLLA DSFDEAQATA LAKEMVERQT 
EHRVQMLERK HQMLSVLTPE QKAEFVKLQN ERMQECGDRM HKRMEKYRNN