Gene VEA_002146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002146 
Symbol 
ID8555801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp562542 
End bp563396 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content45% 
IMG OID646405165 
Product4-hydroxybenzoate polyprenyltransferase 
Protein accessionYP_003284774 
Protein GI262392920 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCAG AAAAAGCCAA AGCATATTGG CAACTGATGC GCATGGATCG CCCGATTGGT 
TCACTGTTAC TGATGTGGCC AACGATTTGG GCGCTAATTA TCTCAGCCCA AGGGATGCCG
AGTTGGGATG TATTTATCGT GTTTGTATTG GGTGTATTCC TAATGCGTAG CGCGGGGTGC
GTGATTAATG ATTTTGCTGA CCGCAAAGTC GACGGCCATG TAAAACGTAC CAAGCAACGC
CCACTGCCAT CAGGGAAAGT GACAGCAAAA GAAGCGATTG GATTATTTTT GGTTTTGGGT
ATCAGCTCAT TCTTGTTAGT GCTGACCATG AACCCGTTGA CGATTCAGCT ATCCTTCGCT
GGCATCGTGT TGGCGTTCAT TTATCCATTT ATGAAGCGTT ACACTCATAT TCCACAACTC
TTTTTAGGCT TAGCTTTTAG CTGGGCAATT CCAATGGCGT GGGCTGCACA AACCGGGGAG
CTACCACTGA TAGTTTGGTT TGTGTTTCTG ATTAACGCTT TATGGACCAT TGCTTATGAT
ACTCAGTATG CGATGGTCGA TCGCGATGAT GATTTAAAGA TTGGCATTAA ATCGACGGCA
ATTTTGTTTG GTCGTCATGA CAAGCTTATT ATTGGTGTGT TGCAACTGAT TACGCTCGCG
ATGTTGGTTT GGTTAGGGCA GTTCTACCAA TTGGGGCAAA GTTACTACTG GACCCTTTTG
ATTGCAGCGT CGTTGTTTGT TTATCAGCAG CACTTAATTC GTCACCGTGA GCGGGAGTTG
TGCTTTAAGG CTTTCCTCAA CAACAACTAT GTTGGCATGG TGATAGCGAT AGGGTTATTG
GTCGCATTTT GGTAA
 
Protein sequence
MSAEKAKAYW QLMRMDRPIG SLLLMWPTIW ALIISAQGMP SWDVFIVFVL GVFLMRSAGC 
VINDFADRKV DGHVKRTKQR PLPSGKVTAK EAIGLFLVLG ISSFLLVLTM NPLTIQLSFA
GIVLAFIYPF MKRYTHIPQL FLGLAFSWAI PMAWAAQTGE LPLIVWFVFL INALWTIAYD
TQYAMVDRDD DLKIGIKSTA ILFGRHDKLI IGVLQLITLA MLVWLGQFYQ LGQSYYWTLL
IAASLFVYQQ HLIRHREREL CFKAFLNNNY VGMVIAIGLL VAFW