Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002137 |
Symbol | |
ID | 8555792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 554972 |
End bp | 555571 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405156 |
Product | ribosomal RNA small subunit methyltransferase D |
Protein accession | YP_003284765 |
Protein GI | 262392911 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAAGAC GTCGCCAGCA AAACTCATCA CAAAAAAAGC CAACAACGGG CTTTGTTCGC ATTATTAGTG GCTTATGGAG AGGCAGAAAA CTTCCTGTAC ACGATGCTGA AGGCTTACGC CCAACGACCG ATCGCGTCAA AGAAACGCTA TTTAACTGGC TGGCTCAAGA TGTGCCGCAA GCAAAATGTC TCGACTTATT TGCCGGCTCC GGCGGCTTAG GCTTTGAGTC AGCTTCGCGC CAAGCAGAGC AAGTGACCAT GGTTGAGCTG AACCCACAAG CTTTTCAGCA ATTACAGAAG AACGTGGCAT CTCTTAACGC GAACAACATC CAAGTAGTGA ATACAGATGC CTTGAGCTTT TTAAAACAGC CGGGTACTGC GCATCATGTG GTGTTTATTG ACCCACCGTT TCGCAAAGGT CTGTTGGATG AGACCGTGGC TCTGCTAGAA CAAAATGGCT GGCTCGCGGA AGATGCGATG ATTTATATTG AAACAGAAAA AGAACTCAAT ATTGCCGACT TACCAGAAAA CTGGCAATTA CATCGAGAAA AAACAGCAGG CCAAGTGAGC TATCGTCTGT ATGAACGTAC CTCCGCATAA
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Protein sequence | MVRRRQQNSS QKKPTTGFVR IISGLWRGRK LPVHDAEGLR PTTDRVKETL FNWLAQDVPQ AKCLDLFAGS GGLGFESASR QAEQVTMVEL NPQAFQQLQK NVASLNANNI QVVNTDALSF LKQPGTAHHV VFIDPPFRKG LLDETVALLE QNGWLAEDAM IYIETEKELN IADLPENWQL HREKTAGQVS YRLYERTSA
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