Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002100 |
Symbol | |
ID | 8555749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 515235 |
End bp | 517088 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405113 |
Product | 3-polyprenyl-4-hydroxybenzoate carboxy-lyase |
Protein accession | YP_003284728 |
Protein GI | 262392874 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00373148 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTA AGGATTTACG CGAATTTATC GACCACCTAG AACAGAAAGG TCGACTTAAA CGCATTGCTC ACCCTGTCGA TCCCGCTTAC GAAATGACAG AAATCAGTGA CCGCACCTTG CGTGCTGGTG GCCCTGCTTT GTTATTCGAG AATCCGATCG GCTACAACGT CCCCGTTCTG ACCAACCTAT TTGGTACACC AGAGCGTGTC GCGATTGGTA TGGGACGTGA AGACGTTAAA GAATTAAGAG AAGTCGGTAA GCTGCTGGCT TATTTGAAAG AACCTGAGCC ACCAAAAGGC TTCAAAGACG CATTGGAAAA ATTGCCAGTG TTCAAGCAAG TATTGAACAT GCCAGCCAAG CGCTTAAGAA AAGCATCGTG CCAAGAGATT GTGTGGCAAG GTGATGAAGT CGACTTGGAC AAAATCCCGG TAATGAGTTG CTGGGCGGAA GACGTTGCAC CACTGCTTAC GTGGGGCTTA ACCGTGACCA AAGGTCCAAA CAAGAAACGT CAGAACCTAG GCATTTATCG TCAGCAGAAA ATTGCCAAGA ACAAAATCAT CATGCGTTGG TTAGCTCACC GTGGTGGTGC GCTTGACCTA CGTGATTGGA TGGAAACCAA TCCAGGTAAA CCTTTTCCGG TTTCGGTTGC GTTTGGCGCA GACCCTGCAA CCATTCTTGG CGCAGTAACA CCAGTGCCAG ATACGCTATC GGAGTACGCG TTTGCAGGTT TGCTGCGTGG AAGCAAAACT GAAGTCGTTA AGTCAGTCAG CAATGATCTG GAAGTGCCAG CAAGCGCGGA AATCGTCATG GAAGGCTATA TCGACCCGAA CGAGTTTGCT GATGAAGGTC CTTATGGTGA TCACACGGGC TACTACAACG AAAAAGAAAA GCATCACGTG TTTACCATTA CGCACATTAC TATGCGTAAA GACCCAATCT ATCACAGTAC CTACACAGGT CGTCCGCCAG ATGAACCTGC TGTATTGGGG GTGGCATTAA ACGAAGTGTT TGTGCCGATT CTGCAAAAGC AGTTCCCAGA AATTGAAGAC TTCTATCTAC CGCCTGAAGG TTGTTCGTAC CGAATGGCAG TCGTCACCAT GAAGAAGCAG TACCCAGGTC ATGCCAAGCG CGTAATGATG GGGGTGTGGT CTTTCTTACG TCAATTCATG TACACCAAGT TTGTTATTGT GTGCGATGAA TCGGTAAACG CGCGAGATTG GAATGATGTC GTTAAAGCCA TGTCAGAGCA TATGGATCCT GTACGTGATA CCTTGATGAT AGACAACACG CCAATCGACT CGCTCGACTT TGCTTCGCCA GTGGTTGGGC TTGGCTCTAA GATGGGCTTG GATGCGACCA TTAAATGGGA TGCCGAGCTG GCGACACGAA CCAAGGTTAC CGAGCGTGAC AATAAAGCGA TTACCGAAGC GGATCTGGAT GCATTAAAAC AGCAATGTCC TGAGATTGTT GACGTCTATC TACCAGCTGC AGCAAACAAC CAATTTGCTG TCGTGACTAT GAAGAAAGAC CAAGCTGGTC AATCTCAAGA ATTGATGGAA TATTTATGGG GATTCTTTTC TCAGTACGCG GATAACAAAT TCATTATCTT GTGCGACGAT GACGTCAATG CACGAGATTG GAATGACATC ATTTGGGCTG TAACAACTCG AATGGACCCA GATAGAGACA CAACTCAAGT GCGTGGTAAT ACTGAGAGTT CATCCAAATT AGGATTGGAT GCGACCAACA AGTTCGAATC TGAAGTCACG CGCGAGTGGG GTACGCCTAT CAAAAAAGAT CCTAAACTTG TGGCTAAAGT CGATGAGATT TGGGACCAGT TAGGTATTCT ATGA
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Protein sequence | MSFKDLREFI DHLEQKGRLK RIAHPVDPAY EMTEISDRTL RAGGPALLFE NPIGYNVPVL TNLFGTPERV AIGMGREDVK ELREVGKLLA YLKEPEPPKG FKDALEKLPV FKQVLNMPAK RLRKASCQEI VWQGDEVDLD KIPVMSCWAE DVAPLLTWGL TVTKGPNKKR QNLGIYRQQK IAKNKIIMRW LAHRGGALDL RDWMETNPGK PFPVSVAFGA DPATILGAVT PVPDTLSEYA FAGLLRGSKT EVVKSVSNDL EVPASAEIVM EGYIDPNEFA DEGPYGDHTG YYNEKEKHHV FTITHITMRK DPIYHSTYTG RPPDEPAVLG VALNEVFVPI LQKQFPEIED FYLPPEGCSY RMAVVTMKKQ YPGHAKRVMM GVWSFLRQFM YTKFVIVCDE SVNARDWNDV VKAMSEHMDP VRDTLMIDNT PIDSLDFASP VVGLGSKMGL DATIKWDAEL ATRTKVTERD NKAITEADLD ALKQQCPEIV DVYLPAAANN QFAVVTMKKD QAGQSQELME YLWGFFSQYA DNKFIILCDD DVNARDWNDI IWAVTTRMDP DRDTTQVRGN TESSSKLGLD ATNKFESEVT REWGTPIKKD PKLVAKVDEI WDQLGIL
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