Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002091 |
Symbol | |
ID | 8555740 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 504945 |
End bp | 505862 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405104 |
Product | protein rarD |
Protein accession | YP_003284719 |
Protein GI | 262392865 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACACCAG AAGACGAACA ACAACGCGCT CGGCAAGGTA TCTTGCTGGC GATTGGTGCC TATACCATGT GGGGCATTGC GCCGATGTAT TTTAAATCCA TCGCACAAGT ATCCCCTTTG GAGATTCTGA GCCACCGGGT GATTTGGTCT TTCTTTTTGC TTGCCGCACT CCTTCACTTT GGCCGTCACT GGCGCTCGGT TTACTACATC GCGAAAGACA AAACGAAGAT CGCTTACCTG ATCGCAAGTT CTGTATTAAT TGGCGGAAAC TGGCTGATTT TCATCTGGGC GGTCAATTCC AATCATATGC TTGACGCGAG CTTAGGCTAT TACATTAACC CATTAATCAA TGTCTTGCTC GGCATGGTCT TTTTGGGAGA GCGACTTCGT AAGTTGCAAT GGTTTGCTGT CGTATTAGCG GGCTGTGGTG TACTGGTCCA ATTGATTGTA TTCGGCTCCG TGCCCGTTGT TGCGATGGCG TTAGCAATGA GTTTCGGCTT CTATGGCCTC TTAAGGAAGA AAGTCAGTGT CGATGCAAAA ACAGGATTGT TTATCGAAAC ATTACTTCTT CTGCCTGTCG CCGCCGTGTA TCTGCTGTTT ATTGCAGAAA CCCCAACGTC GAATATGCTC ACTAACCCGT TAGCATTAAA TAGCTTGTTG ATTGCAGCAG GGGTGATTAC CACACTGCCC CTACTTTGTT TTACGGGTGC GGCAACAAGA CTCAAATTAT CAACATTGGG CTTTTTCCAG TACATTGGCC CAAGCTTGAT GTTCTTACTT GCAGTACTGA TGTATGGCGA ACCCTTTACC ATGGATAAAG CGATTACCTT TGCCTTTATT TGGGGAGCGC TAGTCGTATT TAGCTTTGAT GGACTGCGCA ACAACCGTCG CTCACGCCGA ATCGTTCAGC CACAGTGA
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Protein sequence | MTPEDEQQRA RQGILLAIGA YTMWGIAPMY FKSIAQVSPL EILSHRVIWS FFLLAALLHF GRHWRSVYYI AKDKTKIAYL IASSVLIGGN WLIFIWAVNS NHMLDASLGY YINPLINVLL GMVFLGERLR KLQWFAVVLA GCGVLVQLIV FGSVPVVAMA LAMSFGFYGL LRKKVSVDAK TGLFIETLLL LPVAAVYLLF IAETPTSNML TNPLALNSLL IAAGVITTLP LLCFTGAATR LKLSTLGFFQ YIGPSLMFLL AVLMYGEPFT MDKAITFAFI WGALVVFSFD GLRNNRRSRR IVQPQ
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