| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002072 |
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| Symbol | |
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| ID | 8555721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 484687 |
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| End bp | 486627 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405085 |
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| Product | thiamin biosynthesis protein ThiC |
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| Protein accession | YP_003284700 |
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| Protein GI | 262392846 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAGTC GCAAACAAGC GAGACTGGAA GCAAAACAGT TCATTGAAAC ACTCTCGGTA
CAGCCGTACC CAAATTCCAC AAAAGTATAT GTAGAAGGTT CACGTCCAGA TGTTCGTGTA
CCTATGCGTG AAATAGCGCT AGCAGATAGC CTGATTGGTG GCACAAAAGA AGCGCCAATC
TTCGAGCCTA ATGAGCCAGT ACGCGTTTAC GATACCTCTG GAGTATACAC TGACCCAGAA
CACACCATAG ATCTTTATAA CGGCTTACCT AAGTTAAGAG AAAGCTGGAT TGAAGAGCGC
GGTGACACAG AGTTACTCGA TGAAGTAAGC TCGGTGTACA CCAAAGAACG CTTAGAAGAC
GAAACACTAG ACGATCTTCG TTACGGTAAT CTACCACGTA TTCGACGTGC CAAAGATGGG
CAGTGCGTCA CTCAGCTGCA CTATGCTCGC AAAGGCATTA TTACCCCAGA AATGGAATTC
ATCGCGCTGC GTGAAAACAT GGGTCGTGCC AAGTACCGTG ATGATGTACT GAATCAACAG
CATCCTGGTC AAAGCTTTGG AGCGAATCTT CCAAAAGACA TTACCGCCGA GTTTGTTCGC
AAAGAAGTTG CCGAAGGTCG CGCTATTATC CCTTCTAATA TCAACCACCC AGAATCCGAA
CCAATGATCA TTGGACGTAA CTTTTTGGTC AAAGTAAACG CCAATATTGG TAACTCATCG
GTGACGTCTT CGATTGAGGA AGAGGTTGAG AAGCTAGTGT GGGCGACACG CTGGGGTGGC
GATACTGTTA TGGATCTCTC CACAGGTCGC AATATTCATG AAACTCGAGA ATGGATTCTG
CGTAACAGCC CGGTTCCGAT CGGTACCGTA CCTATGTACC AAGCGCTTGA GAAAGTGAAT
GGTGTTGCGG AAAACCTTAA CTGGGAAGTG ATGCGCGATA CTCTGATTGA GCAAGCAGAG
CAGGGTGTTG ATTACTTCAC TATCCATGCT GGCTTACTAC TGCGCTATGT ACCAATGACA
GCAAAACGCG TTACCGGCAT CGTCTCTCGT GGTGGTTCTA TCATCGCGAA ATGGTGTTTA
GCACATCACC AAGAAAGCTT CTTATATACC CACTTCCGAG AGATCTGTGA AATCTGTGCC
AAGTATGATG TTGCACTTTC TCTCGGTGAT GGTCTGCGCC CTGGTTCGGT TGCCGATGCT
AACGATGAAG CGCAATTTGC GGAGCTTCGT ACCCTTGGCG AGTTGACTAA GGTTGCGTGG
GAATACGACG TACAGGTCAT TATCGAAGGT CCTGGCCATG TTCCAATGCA CATGATCAAA
GAGAACATGG AAGAGCAGCT AGAGCACTGC CATGAAGCTC CGTTCTACAC CCTTGGTCCA
CTGACGACAG ACGTCGCTCC TGGTTACGAC CATATTACGT CAGGTATTGG CGCTGCCATG
ATTGGCTGGT ATGGCTGTGC GATGCTTTGT TACGTAACAC CTAAAGAGCA TCTTGGCTTA
CCAAACAAAG AAGACGTGAA GGTAGGCATG ATCACTTACA AGCTTGCTGC TCACGCTGCT
GATTTGGCGA AAGGGCACCC TGGCGCACAA GTTCGTGATA ACGCGCTTTC TAAAGCACGT
TTTGAATTCC GCTGGGAAGA CCAATTCAAC TTGTCACTCG ACCCAGAAAC CGCTCGCGCT
TTCCATGATG AAACCTTGCC TCAAGAGTCT GGAAAAGTTG CTCACTTTTG TTCGATGTGT
GGACCAAAGT TCTGCTCGAT GAAGATTTCG CAAGAGGTAC GAGAGTACGC GAAAGACACT
GAGCAAGTTG CCGCGGACCA AGCTATCTCG ATCAAAATGC TTGATGATCC TCTTGAGGGG
ATGCGTCAGA AATCGCAAGA ATTTAGAGAG TCAGGTTCTG AGTTATACCA CCCAGCAGCA
CATGCCGAGG TAAGTGATTA A
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| Protein sequence | MSSRKQARLE AKQFIETLSV QPYPNSTKVY VEGSRPDVRV PMREIALADS LIGGTKEAPI
FEPNEPVRVY DTSGVYTDPE HTIDLYNGLP KLRESWIEER GDTELLDEVS SVYTKERLED
ETLDDLRYGN LPRIRRAKDG QCVTQLHYAR KGIITPEMEF IALRENMGRA KYRDDVLNQQ
HPGQSFGANL PKDITAEFVR KEVAEGRAII PSNINHPESE PMIIGRNFLV KVNANIGNSS
VTSSIEEEVE KLVWATRWGG DTVMDLSTGR NIHETREWIL RNSPVPIGTV PMYQALEKVN
GVAENLNWEV MRDTLIEQAE QGVDYFTIHA GLLLRYVPMT AKRVTGIVSR GGSIIAKWCL
AHHQESFLYT HFREICEICA KYDVALSLGD GLRPGSVADA NDEAQFAELR TLGELTKVAW
EYDVQVIIEG PGHVPMHMIK ENMEEQLEHC HEAPFYTLGP LTTDVAPGYD HITSGIGAAM
IGWYGCAMLC YVTPKEHLGL PNKEDVKVGM ITYKLAAHAA DLAKGHPGAQ VRDNALSKAR
FEFRWEDQFN LSLDPETARA FHDETLPQES GKVAHFCSMC GPKFCSMKIS QEVREYAKDT
EQVAADQAIS IKMLDDPLEG MRQKSQEFRE SGSELYHPAA HAEVSD
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