Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001937 |
Symbol | |
ID | 8555566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 330839 |
End bp | 332497 |
Gene Length | 1659 bp |
Protein Length | 552 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646404930 |
Product | methylglyoxal synthase |
Protein accession | YP_003284565 |
Protein GI | 262392711 |
COG category | [I] Lipid transport and metabolism [R] General function prediction only |
COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTATCA TCAAATATTA TATTCTTGGC GCTCTGATCA GTTTATTGGC CGCTATTTAT ATTCCCCAAA TCATGGTTAG CCTGTTGTTC TTGTGGGTAT CTCTTTCTTT AGCATTAGTC AGCGTAGCCT ACGTTTTCGA CATTCCCTCC ATTTTTAGAA AAAACCAAGA CGGTAAGATT GTCAGATGGA TCCGCTGGGC ATTCATCCCC TTTTTGCTGG GTGCTAGAGC GTATAATGCC TGGGAAAGAC GGCGCGATAC CGTGCCTCCT ATCCAAAAAG TCAGCGATAA TTTATACCTC TCCCGTCGGC TATTTCAGAG TGACTTAGAT TTTCTCGAAT CCAATGACAT CTCTTGTATT GTCGATGTCA CCGCAGAATT TGCTGGGCTT GAAAGTGCGA TGACCGACAA GCAGTTTCAC TACCTTTCGA TTCCGGTACT TGACCACAAA GCCCCAACGC TAGAGCGCCT TCGCCATGCG ATTAACTGGA TTGATACGCA AATCTCGTGC TCGCGAGCTG TGGTTGTGCA TTGTGCGTTA GGGCGCGGTC GTTCGGTGTT TGTTGTTGCG GCGTATCTAC TGAGCAAAGA TCCGTCGCTG ACGGTTGAAT CTGTGATGAA AAAAATCAAT GACGTGCGCA GTACCGCGAG ATTGAATAAA TTGCAGATCA AAACGTTACG AGCGATAAGT GAAAAAGGCG TACTGGGTCT GGATCAGTCC ACTTGGATGG TGGTTAACCC TGTTGCAGGT GGCGGCAAAT GGGAGGAAAA CGAACAGCAC TTGATTCGTG AACTAACCAA AAAATATCGT TTGAGTATTC ATCAAACCAC CACAAACCTC AGCGCCGAGC AGCTAACACA ACAGGCAAAA GAAAGTGGGG CTAAGCAAAT CATCGTAGCG GGTGGCGATG GCACAGTGAC GGAAGTGGCG AGCCAGCTGG TAGGTACCGA CCTCAAACTC GGTATTGTTC CGCTCGGAAC CGCCAATGCG TTGTGTCATG TGCTCTATGG GGTTGGGGCA AAATTGTCAC CCGTTGAAAA AGCGTGTGAA GCATTGCTAG CAGGTCACTG CCAACGTATT GATACGGCGG AGTGTAATCA GAGGCTTATA TTGTTAGTCC TAGGTATTGG ACTAGAGCAG AAAATGATCG AGCATGCGCA GCGAGAAGAG AAAAACACCT TTGGACAATT GGCCTATTTA ACGGGCTTTT TTAACGCGGT GGTGGCGGAA GATACGCAAA CGTTGACCGT TGCGATGGAT GCGCCATTTG AAGATGAAAA CCGCGAAAAT GGATCACAAA CGCTAGAAGT TCATAGCTTT GTCGTTGCGA ACATCGCTCC TTTTAGTACG TTGCTCGCGC AAGGTGGTGG TGCTCCGCAG CCTGACGATG GCAAGCTGCA TATCACGTAT TTAGATAACA CCGAATCTTT AGGCGGACGC CTCATCGCAT TGTCTGATCT GACATTAACC AGCGTAGGTG CGCAGGAGGA ATCGACTCAT TTTCAATACG CGACGGCTCA GAATGTCACT ATTTCTGCGA ACAAACCGAT TGAGTATGTG ATTGATGGTG AGCTTTATTC TGATGAGCAA TTAGCGATTA AGCTTCGTCC AAAATCGTTG AATGTATTTG TCCCAAGCGG GAGAAGTAAA TCGACTTAG
|
Protein sequence | MFIIKYYILG ALISLLAAIY IPQIMVSLLF LWVSLSLALV SVAYVFDIPS IFRKNQDGKI VRWIRWAFIP FLLGARAYNA WERRRDTVPP IQKVSDNLYL SRRLFQSDLD FLESNDISCI VDVTAEFAGL ESAMTDKQFH YLSIPVLDHK APTLERLRHA INWIDTQISC SRAVVVHCAL GRGRSVFVVA AYLLSKDPSL TVESVMKKIN DVRSTARLNK LQIKTLRAIS EKGVLGLDQS TWMVVNPVAG GGKWEENEQH LIRELTKKYR LSIHQTTTNL SAEQLTQQAK ESGAKQIIVA GGDGTVTEVA SQLVGTDLKL GIVPLGTANA LCHVLYGVGA KLSPVEKACE ALLAGHCQRI DTAECNQRLI LLVLGIGLEQ KMIEHAQREE KNTFGQLAYL TGFFNAVVAE DTQTLTVAMD APFEDENREN GSQTLEVHSF VVANIAPFST LLAQGGGAPQ PDDGKLHITY LDNTESLGGR LIALSDLTLT SVGAQEESTH FQYATAQNVT ISANKPIEYV IDGELYSDEQ LAIKLRPKSL NVFVPSGRSK ST
|
| |