Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001917 |
Symbol | |
ID | 8555546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 310656 |
End bp | 313442 |
Gene Length | 2787 bp |
Protein Length | 928 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646404910 |
Product | DNA polymerase I |
Protein accession | YP_003284545 |
Protein GI | 262392691 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000349897 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGTA TTCCTGAAAA TCCGTTGATC CTTATCGACG GCTCTTCTTA CCTATATCGC GCTTTTCACG CCTACCCGGG CACCATGAGT AATGGTGAAA TTCCAACGAA TGCCGTTTAC GGTGTCGTGA ACATGTTACG TAGCATGATG CGTCAGTTTG CGTCTGAGCG CATCGCGGTG GTTTTCGATG CGAAGGGAAA AACCTTCCGT GATGATATGT ATGCAGAATA CAAAGCTAAT CGTCCGCCAA TGCCGGATGA TCTGCGTTGC CAAATTGAAC CGTTGCACAA TGTTATTCGC GCGATGGGTT TACCACTGAT CTGCGTTCCT GGTGTCGAAG CAGATGACGT CATTGGTACG TTGGCGCATC AAGCATCACA AAAAGGCATG CCTGTATTGA TCAGTACTGG TGATAAAGAC ATGGCGCAGT TGGTGGATGA TAATATTACC TTGATCAACA CCATGACGAA CGTCGTGATG GATCGTGAAG GTGTGGTTGA AAAGTTTGGC ATTCCACCTG AGTTAATCAT CGACTACCTA GCGCTGATGG GCGATAAAGT AGATAACATC CCTGGTGTAC CAGGCGTGGG TGATAAAACA GCGACCGCAC TACTGCAAGG TATTGGCGGT CTGACTAAGC TGTATGAAAA TCTCGATGAC ATTGCTGCGC TCGGTTTCCG TGGTTCTAAA ACCATGGCGA AGAAGCTCAT CGATAACAAA GAAAATGCCA TGCTGTCGTA CGAGCTCGCA ACCATTAAAT TGGATGTTGA ACTTGAAGAA ACGCCAGAAT CACTGCTGAA AGCGGAACCA AATAAAGACG AACTGGTGAA GCTGTATGGT CAACTGACGT TTAAATCTTG GTTGAACGAA TTACTTGAAG GTGGTTCTGG GTCGGTAGAA GCTGTTGAGC TTGCTGGCTC TGCTCAAGCC TCTGCTTCTC ATGCCGAGAT GGAAACTTCC GCAGTGACAA TCGACCGCAG CCAATATGAA ACGATTCTGG ATGAAGAAAC CTTCAATGCG TGGCTAGACA AACTTCAAAC GGCCGAGTTG TTTGCGTTTG ATACGGAAAC CGACAACCTA GATTACATGC TAGCGAATCT GGTTGGTTTG TCATTCGCTG TCGATGAAGG TATTGCTGCT TATGTGCCTG TTGCACATGA CTACCTAGAT GCACCTGAAC AGCTTGATCG TGATTGGGTT CTAGAACAGC TGAAGCCAAT TCTTGAAGAT GCAGCGAAAG CAAAAGTTGG TCAAAACTTA AAGTATGATG CGTCTGTATT GGCTCGTTAT GACATTGAGC TAAAAGGTAT CAAGCACGAC ACGATGTTGG AATCGTACAT TTACAACAGT GTCGGCGGTA AACACGATAT GGACAGCTTG GCGCTGCGCT TCCTACAGCA TAGTTGCATT TCTTTTGAGC AAATTGCAGG TAAAGGCAAA AATCAGCTTA CGTTTAACCA AATCGAGTTG GAACAAGCAT CGCCATACGC GGCAGAAGAT GCGGATGTGA CCCTTCGTCT GCACAATCGC TTGTTTGCGA ATATCGAGCA GGATGAAAGC CTAAAGACAG TTTACGAAGA GATTGAAATG CCGTTGGTGC CAGTTCTTTC GCGCATTGAA CGCACTGGGG TCTTTATCGA TGAAATGAAG CTGAGTGCGC AGTCGGTCGA GATTACCGCT CGCCTTGATG AGCTTGAAAA GAAAGCGTAT GAAATTGCAG AGCAAGAGTT CAACATGAAC TCGCCAAAGC AATTACAAGC CATCCTATTT GAAAAAATGG GTTTACCGGT GGTGAAGAAA ACGCCATCAG GTACACCATC GACGAATGAA GAAGTGCTGC AAGAGCTTGC CTTAGATTAC CCACTGCCAA AATTGATTTT GGAATACCGT GGTTTGGCGA AGCTTAAATC GACGTACACG GACAAGCTGC CGAAGATGAT CAACCCAACA ACAGGGCGTG TGCATACTTC TTACCATCAA GCAGTAACCG CAACAGGTCG TCTATCTTCT ACCGATCCGA ACTTACAAAA CATTCCAATT CGTAACGAAG CCGGCCGTCG TATTCGCCAA GCGTTTGTCG CACCATCTGG GCATAAGATC TTAGCGGTCG ACTACTCGCA AATCGAACTG CGCATCATGG CTCACCTTTC TGGCGACCAA GCGTTATTAG ATGCCTTCCG TGATGGTAAA GACATTCACG CTGCAACTGC GGCAGAAATT ATGGGTCTGG ATATTGAACA AGTATCCAGT GAGCAGCGTC GCCGTGCTAA AGCCGTTAAC TTCGGGCTTA TCTATGGCAT GAGTGCATTT GGTTTGGCGA AGCAGCTTGG TATCCCTCGC GGCGAAGCAC AAGCCTACAT GGATAAATAC TTTGAGCGTT ACCCTGGCGT TATGCAGTAC ATGGAAGACA CGCGCAGCAC GGCTGCAGAT AAGGGCTATG TTGAAACGAT TTTTGGTCGA CGTTTGCATT TACCAGAAAT CAAATCGCGC AACGGTATGC GTCGTAAAGC TGCTGAACGT GCGGCAATCA ACGCACCGAT GCAAGGTACA GCTGCGGACA TCATTAAGAA AGCGATGCTG TTGGTTGATC AGTGGATTCA GGAAGAAGGC AATGGCCGTG TGAAGTTGTT AATGCAAGTA CACGATGAAT TGGTCTTTGA AGTTGAAGAG TCATCATTGT CCGAAATTGA AAGTAAAGTA CAGAAATTGA TGGAATCTGC AGCAGAGCTA AAAGTACCGT TGGTTGCAGA AGCAGGGCAC GGTGACAACT GGGATCAAGC TCATTAG
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Protein sequence | MASIPENPLI LIDGSSYLYR AFHAYPGTMS NGEIPTNAVY GVVNMLRSMM RQFASERIAV VFDAKGKTFR DDMYAEYKAN RPPMPDDLRC QIEPLHNVIR AMGLPLICVP GVEADDVIGT LAHQASQKGM PVLISTGDKD MAQLVDDNIT LINTMTNVVM DREGVVEKFG IPPELIIDYL ALMGDKVDNI PGVPGVGDKT ATALLQGIGG LTKLYENLDD IAALGFRGSK TMAKKLIDNK ENAMLSYELA TIKLDVELEE TPESLLKAEP NKDELVKLYG QLTFKSWLNE LLEGGSGSVE AVELAGSAQA SASHAEMETS AVTIDRSQYE TILDEETFNA WLDKLQTAEL FAFDTETDNL DYMLANLVGL SFAVDEGIAA YVPVAHDYLD APEQLDRDWV LEQLKPILED AAKAKVGQNL KYDASVLARY DIELKGIKHD TMLESYIYNS VGGKHDMDSL ALRFLQHSCI SFEQIAGKGK NQLTFNQIEL EQASPYAAED ADVTLRLHNR LFANIEQDES LKTVYEEIEM PLVPVLSRIE RTGVFIDEMK LSAQSVEITA RLDELEKKAY EIAEQEFNMN SPKQLQAILF EKMGLPVVKK TPSGTPSTNE EVLQELALDY PLPKLILEYR GLAKLKSTYT DKLPKMINPT TGRVHTSYHQ AVTATGRLSS TDPNLQNIPI RNEAGRRIRQ AFVAPSGHKI LAVDYSQIEL RIMAHLSGDQ ALLDAFRDGK DIHAATAAEI MGLDIEQVSS EQRRRAKAVN FGLIYGMSAF GLAKQLGIPR GEAQAYMDKY FERYPGVMQY MEDTRSTAAD KGYVETIFGR RLHLPEIKSR NGMRRKAAER AAINAPMQGT AADIIKKAML LVDQWIQEEG NGRVKLLMQV HDELVFEVEE SSLSEIESKV QKLMESAAEL KVPLVAEAGH GDNWDQAH
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