Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001864 |
Symbol | |
ID | 8555493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 252965 |
End bp | 255085 |
Gene Length | 2121 bp |
Protein Length | 706 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646404857 |
Product | GTP pyrophosphokinase (p)ppGpp synthetase II/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase |
Protein accession | YP_003284492 |
Protein GI | 262392638 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTATCTAT TCGATAGCCT CAAAGACGTT GCCCAAGAAT ACCTAACAGA GCCTCAGATT GAGGCTCTGC GTCAATCTTA TGTGGTAGCG AGAGATGCCC ATGAAGGGCA AACCCGCTCT AGCGGTGAAC CATACATCAT CCACCCTGTC GCTGTGGCTC GTATCTTGGC CGAAATGCGC CTTGATATCG AAACCCTCCA AGCTGCTTTG CTGCATGACG TCATTGAAGA CTGTGATGTA ACTAAAGAAG ATCTCGAAGA GAAATTCGGC AACACTGTCG CAGAATTGGT TGATGGTGTA TCTAAACTGG ACAAACTCAA ATTCCGCGAT AGGAAAGAGG CTCAGGCTGA GAACTTTCGT AAGATGGTTC TGGCCATGGT GCAAGATATC CGCGTCATTC TGATCAAACT GGCTGACCGC ACGCACAACA TGCGTACGCT TGGCGCGCTT CGACCAGATA AAAAGCGTCG TATTGCTCGT GAAACGTTAG AGATTTACGC GCCACTCGCT CATCGTCTTG GTATTCACAA TATCAAAACC GAACTCGAAG AGCTGGGCTT TGAAGCGCTA TATCCCAACC GCTACCGCGT ACTAAAAGAA GTGGTAAAAG CGGCACGCGG CAATCGTAAA GAGATGATCC AACGCATCCA CAGCGAAATA GAAGGCCGTC TGCAAGATTT CGGCTTGAAT GCTCGCGTCG TTGGTCGTGA GAAAAACCTG TTCTCTATCT ATAACAAGAT GAAAACCAAA GAACAGCGCT TTCACACCAT CATGGATATC TATGCGTTCC GAGTCGTTGT TGATACCGCT GATACTTGTT ATCGCGTTTT AGGCCAAGTA CACAGCTTGT ATAAGCCACG TCCTGGTCGC ATGAAAGATT ACATCGCGGT ACCAAAGGCG AACGGCTACC AATCGCTACA CACTTCCATG GTTGGCCCAC ATGGCGTACC TGTTGAAGTT CAGATCCGTA CTGAAGATAT GGATCAAATG GCGGACAAAG GTGTCGCGGC ACACTGGTCT TACAAAGACA AAGGCGACAA GTCTGGCACC ACTGCGCAAG TGAAAGCTCA GCGTTGGATG CAAAGCCTGT TAGAGCTACA ACAAAGCGCG GGTAACTCAT TCGAATTCAT TGAAAACGTA AAATCCGATC TTTTCCCAGA TGAGATTTAC GTCTTCACAC CAAAAGGTCG TATCGTTGAA TTGCCTTTAG GCGCAACGGC TGTCGACTTT GCCTATGCCG TACATACCGA TGTAGGCAAC TCTTGTGTTG GTGCTCGTGT TGATCGTAAC CCTTACCCAT TGAGTAAGGC ATTGAAAAAC GGTCAGACGG TGGAAATTAT CAGTGCCCCA GGTGCGCGTC CGAATGCGGC ATGGCTAAAC TATGTCGTGA CTTCTCGTGC CCGCACTAAG ATTCGTCAAG TACTGAAAAC GATGCGTCGT GAAGAGTCGA TTACTTTAGG TCGTCGCCTA CTTAATCACG CACTTGGCCG CCACTCGATT GATTCAATCT ATCCAGAAAA TATCCAAGAA GTCTTGAATG ATCTTCGCCT AGAAAGCATC GATGATTTAT TGGCTGCTAT TGGATTGGGT GAGTTGATGA GCATTGTGAT CGCACGTCGT CTCCTTGGTG ACACCGAAGA ACTCACGACA ACAAGCTCAA TCCCAACGGA CTCGAAGAAG AAGCTTCCGA TTCGTGGCGC AGAAGGCTTA TTGCTGACGT TTGCAAATTG TTGTCATCCT ATCCCAGATG ATCACATTAT TGCTCACGTA TCGCCTGGTC GTGGTTTGGT TGTTCACCGA GAAACATGTC CAAATGTTCG CGGTTATCAG AAAGAGCCAG ACCGTTATAT GGCTGTCGCT TGGTCTGACG ACTACGATAA AGAGTTCATT GCTGAACTTA AAGTCGACAT GCTTAACAAC CAAGGTGCTC TTGCAGAACT GACCAACGTG ATCTCGAAAA CAGGGTCAAA CATTCATGGT CTTTCAACGG AAGAACGTGA TGGTCGTTTG TACACTGTGA CTGTGCTGTT GACGACGAAA GATCGCGTCC ACCTTGCTGG TATCATGCGT AAGATTAAGG CAATGCCTCA AGCAACCCGA GTCAGACGCA GAAAGAACTA A
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Protein sequence | MYLFDSLKDV AQEYLTEPQI EALRQSYVVA RDAHEGQTRS SGEPYIIHPV AVARILAEMR LDIETLQAAL LHDVIEDCDV TKEDLEEKFG NTVAELVDGV SKLDKLKFRD RKEAQAENFR KMVLAMVQDI RVILIKLADR THNMRTLGAL RPDKKRRIAR ETLEIYAPLA HRLGIHNIKT ELEELGFEAL YPNRYRVLKE VVKAARGNRK EMIQRIHSEI EGRLQDFGLN ARVVGREKNL FSIYNKMKTK EQRFHTIMDI YAFRVVVDTA DTCYRVLGQV HSLYKPRPGR MKDYIAVPKA NGYQSLHTSM VGPHGVPVEV QIRTEDMDQM ADKGVAAHWS YKDKGDKSGT TAQVKAQRWM QSLLELQQSA GNSFEFIENV KSDLFPDEIY VFTPKGRIVE LPLGATAVDF AYAVHTDVGN SCVGARVDRN PYPLSKALKN GQTVEIISAP GARPNAAWLN YVVTSRARTK IRQVLKTMRR EESITLGRRL LNHALGRHSI DSIYPENIQE VLNDLRLESI DDLLAAIGLG ELMSIVIARR LLGDTEELTT TSSIPTDSKK KLPIRGAEGL LLTFANCCHP IPDDHIIAHV SPGRGLVVHR ETCPNVRGYQ KEPDRYMAVA WSDDYDKEFI AELKVDMLNN QGALAELTNV ISKTGSNIHG LSTEERDGRL YTVTVLLTTK DRVHLAGIMR KIKAMPQATR VRRRKN
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