| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001803 |
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| Symbol | |
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| ID | 8555432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 194429 |
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| End bp | 195619 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646404796 |
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| Product | putative capsular polysaccharide biosynthesis protein D |
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| Protein accession | YP_003284431 |
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| Protein GI | 262392577 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAATA TTCTCTCTCT TATCGGTCGT ACCGATGCTT TATTCACTCA AGACATCTCA
AATCAAGAAG TTGAATTGTC AAAGATTGTC TCTGAATCTC GCTTTCTTGT CTTAGGTGGG
GCGGGCTCTA TTGGTCAAGC GGTCACGAAA GAGATTTTTA AACGTAACCC AAAGAAACTT
CATGTTGTTG ATATTAGTGA AAATAATATG GTTGAGTTGG TTCGTGATAT TCGTAGCTCT
TTTGGTTACA TTGATGGCGA TTTTCAAACA TTCGCATTGG ATATTGGTTC CATTGAGTAC
GATGCGTTTA TCAAATCGGA TGGGCAGTTT GACTACGTGC TGAACTTGTC AGCGCTGAAA
CACGTGCGCA GTGAAAAAGA TCCTTTCACA CTTATGCGTA TGATCGACGT GAATGTATTC
AATACAGATA AGACCATCCA GCAATCAATA GAATCTGGAG CGAAGAAATA TTTCTGTGTA
TCGACAGACA AAGCGGCAAA TCCAGTCAAT ATGATGGGAG CGTCTAAGCG CATTATGGAG
ATGTTCTTGA TGCGTAGAAG TAAGCAAATG TCGATTTCAA CCGCTCGCTT TGCCAATGTC
GCATTTTCTG ACGGCTCTTT ACTGCACGGC TTCAATCAAC GTATTCAAAA GCGTCAACCT
ATTGTTGCTC CTAATGACAT AAAGCGCTAT TTCGTAACGC CACAAGAGTC GGGTGAGCTC
TGCCTGATGT CTTGTATTTT TGGTGAAAAC CGAGACATCT TTTTCCCTAA ATTGAGTGAA
GCGCTTCACT TAATTTCATT TGCTGATATT GCAGTGAAAT ATCTAGAGCA ATTGGGTTAT
GAACCATATC TCTGTAGCAG TGAAGATGAG GCTCGTGAAC TGGCGAAAAC TTTACCTGAG
CAAGGTAAAT GGCCTTGCTT GTTTACAGAA AGTGATACTA CGGGTGAGAA AGATTTTGAG
GAGTTCTTCA CGGATAAAGA AGTCCTTGAT ATGGAACGCT TTGAAAACTT AGGCATCATC
AAAAATGAAC CTCTTTTCGA ACAAGCTCTT TTGACTTTGT TCGAGCAAAG CATTGCTGAG
ATGAAAGATA AACGTGAGTG GAGCAAGGAG CAAATTGTAG AATTGTTCTT TACCATGATT
CCCGACTTTG GCCACAAAGA AACGGGAAAA TACCTAGACA GCAAGATGTA A
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| Protein sequence | MSNILSLIGR TDALFTQDIS NQEVELSKIV SESRFLVLGG AGSIGQAVTK EIFKRNPKKL
HVVDISENNM VELVRDIRSS FGYIDGDFQT FALDIGSIEY DAFIKSDGQF DYVLNLSALK
HVRSEKDPFT LMRMIDVNVF NTDKTIQQSI ESGAKKYFCV STDKAANPVN MMGASKRIME
MFLMRRSKQM SISTARFANV AFSDGSLLHG FNQRIQKRQP IVAPNDIKRY FVTPQESGEL
CLMSCIFGEN RDIFFPKLSE ALHLISFADI AVKYLEQLGY EPYLCSSEDE ARELAKTLPE
QGKWPCLFTE SDTTGEKDFE EFFTDKEVLD MERFENLGII KNEPLFEQAL LTLFEQSIAE
MKDKREWSKE QIVELFFTMI PDFGHKETGK YLDSKM
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