| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001798 |
|---|
| Symbol | |
|---|
| ID | 8555427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 189235 |
|---|
| End bp | 190293 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 646404791 |
|---|
| Product | D-glycero-D-manno-heptose 1-phosphate guanosyltransferase |
|---|
| Protein accession | YP_003284426 |
|---|
| Protein GI | 262392572 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCATT GTTGGAAAAA TGTTTTAATT AAGCCAACCA GTTCATTACT TGATGCGTTA
GAAATTATAA ACAATGAAGC GTTGAGAGTT GTGCTAGTTG TTGACGATAA TGACCATCTT
TTGGGGGTCG TTACGGATGG TGATATTCGT CGTGGGTTGC TTAAAAACTT GCCTTTGACT
GCTGATGTAG CGCAAGTGAT GAACACTAAC CCATTGACGG CTAATATTAA CACCCCTCGT
GAAGAGTTAA TTTCAGCAAT GGAGAGCCGT AGCGTTCTTT CTATTCCATT GATAAAAAAC
GGAAAAGTGG TTGGTTTAGA AACTTTGCAC GGTGCGCTAC GTCAACCAAC CTATCAAAAT
CCCGTTTTTC TCATGGCTGG TGGTTTCGGG ACTCGGTTGA AACCTCTGAC TGATACATGT
CCTAAGCCAA TGCTCAAAAT TGGTGGTAAG CCTATTTTAG AAACGGTTAT TCGAAGCTTC
ATTAAGGCTG GTTTTGTTAA TTTCTATATT TCTACTCATT ACATGCCGGA GCAGATTGAG
CAGTATTTTG GTGATGGCTC TAAGCTCGGG GTAAATATCA CCTACGTTTA TGAAGAGTCT
CCGTTAGGTA CTGGCGGTGC TTTGGGTTTG CTACCTAAGG ACTTACCAGC AGACCTGCCA
TTAATAATGA TGAATGGCGA TGTCTTAACG AAAGTTGATT TTCAGAGACT TCTGGAGTTC
CATACAGAAA ATCAAGCTGA TGCAACGATG TGTGTCCGTG AATATGATTA TCAGATCCCG
TATGGTGTCA TCAATGGCGA TGGCAATAGA ATTACCAGCA TGGTAGAAAA ACCAATCCAA
CGTTTTTTTG TTAATGCCGG AATATACGTT GTATCTCCGA GAGTCATCCA ATCCGTACCG
AAAAATCATC ATATTGATAT GCCGACTTTA CTTGAGCAAC ATATGCATGA ACGTGAAAAT
GTACTCATGT TTCCAATTCA CGAGTACTGG CTTGACATTG GTAGAATGGA TGATTTTAAT
CGCGCTCAAG CAGATATTCA TACGTTAGGT GTACTGTAG
|
|---|
| Protein sequence | MSHCWKNVLI KPTSSLLDAL EIINNEALRV VLVVDDNDHL LGVVTDGDIR RGLLKNLPLT
ADVAQVMNTN PLTANINTPR EELISAMESR SVLSIPLIKN GKVVGLETLH GALRQPTYQN
PVFLMAGGFG TRLKPLTDTC PKPMLKIGGK PILETVIRSF IKAGFVNFYI STHYMPEQIE
QYFGDGSKLG VNITYVYEES PLGTGGALGL LPKDLPADLP LIMMNGDVLT KVDFQRLLEF
HTENQADATM CVREYDYQIP YGVINGDGNR ITSMVEKPIQ RFFVNAGIYV VSPRVIQSVP
KNHHIDMPTL LEQHMHEREN VLMFPIHEYW LDIGRMDDFN RAQADIHTLG VL
|
|---|
| |