Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001749 |
Symbol | |
ID | 8555378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 135652 |
End bp | 136983 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646404742 |
Product | ATP-dependent hsl protease ATP-binding subunit HslU |
Protein accession | YP_003284377 |
Protein GI | 262392523 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.28369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAA TGACGCCTCG CGAAATCGTT CATGAATTGA ACCGCCACAT TATCGGTCAA GAAAAAGCCA AGCGTTCGGT TGCGATTGCA CTTCGTAACC GCTGGCGCCG TATGCAGCTT GAAGAAAGCT TGCGCGCCGA AGTGACGCCA AAAAACATTT TGATGATTGG TCCTACTGGT GTTGGTAAGA CTGAAATCGC ACGCCGCCTC GCAAAACTGG CAAATGCCCC TTTCATCAAA GTTGAAGCGA CAAAATTCAC AGAAGTGGGT TACGTTGGTA AAGAAGTTGA AACCATCATC CGTGACCTGA CTGATGTCGC GGTAAAAATG ACGCATCAAC AAGCGATGGA AAAAGTAAAA TTCCGCGCTG AAGAGCAAGC GGAAGAACGC ATTCTTGATG CGCTACTGCC ACCAGCACGT GATAGCTGGG GTCAAGCAGA GCAAACGGAA GAGTCTTCTC ACACTCGCCA GATCTTCCGT AAGAAACTGC GTGAAGGCCA ACTAGACGAT AAAGAAATTG AAATCGACGT AGCCGCACCA CAAATGGGCG TAGAGATCAT GGCGCCCCCA GGTATGGAAG AGATGACCAA CCAGCTGCAA GGCATGTTCC AAAACCTGGC TGGCGATACT AAGAAAAAGC GTAAGCTGAA AATCAAAGAC GCGATGAAAG CGCTAGCGGA AGAAGAAGCA GCGAAATTGG TTAACCAAGA AGAGCTAAAA GAAGCAGCGA TTTTCAACGT TGAAAACAAC GGCATCGTAT TTATCGATGA GATTGACAAG ATCTGTAAAC GCGGTGAGAG CTCAGGCCCA GACGTTTCAC GCGAAGGTGT TCAGCGCGAC CTACTTCCAC TGATTGAAGG CAGCACGGTA TCAACCAAGC ACGGCATGGT AAAAACAGAC CACATTCTGT TTGTTGCATC TGGTGCATTC CAAGTAGCAA AACCATCTGA TTTGATCCCA GAATTACAAG GTCGTCTACC AATTCGTGTT GAGCTAGAAG CACTAAGCAG CAACGACTTC AAACGCATTC TGACAGAGCC AAAAGCCTCT CTAACAGAGC AGTACGTTGC GTTGATGAAA ACGGAAGATG TGGACATCGA GTTCACAGAA GATGGCATCA CGCAAATCGC GGAAGCGGCA TGGACGGTCA ACGAAAGCAC AGAAAACATC GGTGCTCGTC GCTTACACAC CGTTATGGAA CGCTTAATGG ATGAAATCTC TTACGACGCG GCGGAGCAAT CTGGCGCGAA ATTTGTTATC GATGCCGCTT ATGTGAAAGA GCGCCTAGGC GACACGATTG AAGATGAAGA TCTAAGCCGC TTTATTCTTT AA
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Protein sequence | MSEMTPREIV HELNRHIIGQ EKAKRSVAIA LRNRWRRMQL EESLRAEVTP KNILMIGPTG VGKTEIARRL AKLANAPFIK VEATKFTEVG YVGKEVETII RDLTDVAVKM THQQAMEKVK FRAEEQAEER ILDALLPPAR DSWGQAEQTE ESSHTRQIFR KKLREGQLDD KEIEIDVAAP QMGVEIMAPP GMEEMTNQLQ GMFQNLAGDT KKKRKLKIKD AMKALAEEEA AKLVNQEELK EAAIFNVENN GIVFIDEIDK ICKRGESSGP DVSREGVQRD LLPLIEGSTV STKHGMVKTD HILFVASGAF QVAKPSDLIP ELQGRLPIRV ELEALSSNDF KRILTEPKAS LTEQYVALMK TEDVDIEFTE DGITQIAEAA WTVNESTENI GARRLHTVME RLMDEISYDA AEQSGAKFVI DAAYVKERLG DTIEDEDLSR FIL
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