Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001739 |
Symbol | |
ID | 8555368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 126967 |
End bp | 127791 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646404732 |
Product | LSU ribosomal protein L2p (L8e) |
Protein accession | YP_003284367 |
Protein GI | 262392513 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000188228 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTATTG TTAAATGTAA GCCGACTTCC CCTGGTCGTC GTCACGTTGT TAAAGTTGTT AACGCTGACC TACACAAGGG CAAGCCATAC GCACCTCTTC TAGAGAAAAA CTCTAAGAAC GGTGGTCGTA ACAACAAGGG TCGTATCACA GTACGTCACA TCGGCGGTGG TCACAAGCAC CACTACCGTG TAGTTGACTT CAAACGTACT AAAGATGGTA TTCCAGCGAC AGTTGAGCGT CTTGAATACG ATCCAAACCG TAGCGCAAAC ATTGCTCTAG TTCTTTACAA AGACGGTGAG CGTCGCTACA TCCTAGCACC TAAAGGTGTT GTAGCTGGTG ATGTTATTCA GTCTGGTGTT GATGCACCAA TCAAAGCTGG TAACACTCTA CCAATGCGTA ATATCCCAGT AGGTTCAACA GTACATAACG TTGAACTTAA GCCTGGTAAA GGTGGTCAGC TAGCTCGTTC GGCTGGTGCT TACGCTCAAA TCGTTGCTCG CGACGGTGCG TACGTAACTA TCCGTCTACG TTCTGGCGAG ATGCGCAAAG TTCTTTCTGA AGGCCGTGCA ACAATCGGTG AAGTTGGTAA CTCTGAGCAC ATGCTACGTG AACTTGGTAA AGCAGGTGCA TCACGTCATC GCGGTATCCG TCCAACGGTT CGTGGTGTTG TAATGAACCC GATTGACCAC CCACACGGTG GTGGTGAAGG CCGTACTTCT GGTGGTCGTC ACCCAGTATC TCCTTGGGGT ATGCCTACTA AAGGCTTCAA GACTCGTAAG AACAAACGCA CTGACAAGTA CATCGTACGT CGTCGTAACA AGTAA
|
Protein sequence | MAIVKCKPTS PGRRHVVKVV NADLHKGKPY APLLEKNSKN GGRNNKGRIT VRHIGGGHKH HYRVVDFKRT KDGIPATVER LEYDPNRSAN IALVLYKDGE RRYILAPKGV VAGDVIQSGV DAPIKAGNTL PMRNIPVGST VHNVELKPGK GGQLARSAGA YAQIVARDGA YVTIRLRSGE MRKVLSEGRA TIGEVGNSEH MLRELGKAGA SRHRGIRPTV RGVVMNPIDH PHGGGEGRTS GGRHPVSPWG MPTKGFKTRK NKRTDKYIVR RRNK
|
| |