Gene VEA_001728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001728 
Symbol 
ID8555357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp122567 
End bp122959 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content44% 
IMG OID646404721 
ProductSSU ribosomal protein S8p (S15Ae) 
Protein accessionYP_003284356 
Protein GI262392502 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0096] Ribosomal protein S8 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000120739 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCATGC AAGATCCGAT TTCGGATATG CTGACCCGCG TTCGTAACGG TCAGGCAGCA 
AACAAAGTTG CTGTAAAAAT GCCTTCTTCA AAGCTTAAAG TTGCAATTGC TGCACTACTA
AAAGCTGAAG GTTACATCGT TGACTTCGCT GTTGAAGGCG AAGCAAAACC TGAGCTAGAA
GTTACACTTA AGTACTTCCA AGCTAAACCA GTAATCGAGC AACTTAAACG TGTTTCTCGT
CCAGGTCTAC GTGTTTACAA GAAGAAAGAT GAACTTCCTT CTGTAATGGG TGGTCTTGGT
ATTGCTATCG TTTCAACTTC CAAGGGTCTT ATGTCAGACC GCGCTGCACG TAAAGCAGGT
CTTGGTGGTG AAATCATCGC TTACGTAGCT TAA
 
Protein sequence
MSMQDPISDM LTRVRNGQAA NKVAVKMPSS KLKVAIAALL KAEGYIVDFA VEGEAKPELE 
VTLKYFQAKP VIEQLKRVSR PGLRVYKKKD ELPSVMGGLG IAIVSTSKGL MSDRAARKAG
LGGEIIAYVA