| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001680 |
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| Symbol | |
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| ID | 8555309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 76641 |
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| End bp | 79220 |
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| Gene Length | 2580 bp |
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| Protein Length | 859 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646404673 |
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| Product | TRAP-type uncharacterized transport system fused permease component |
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| Protein accession | YP_003284308 |
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| Protein GI | 262392454 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGA ATCAAGCTCC GTCACAAGAT GTGCAAGAAA TGGTGGCTCA GGCAGACACA
GGTGCACGTA GCCCCTCGGG AATGCAAGGA CGAATCCTTT GGTTTGTTCC TCTGTGTTGG
TCACTATTTC AATTATGGTA CGCATCTCCG CTACCATTTA TTTTTAATTT CGGCGTACTG
AACGACACGG AAGCGCGATC AATCCACCTC ACTTTCGCGA TCTTCTTGGC TTTCACTGCT
TATCCAGCTA TGAAAAATTC CCCTCGCGAT CATATCCCTC TTGTCGATTG GATATTGGCG
CTAGCAGGTA GTTTTTCTGC GGCATATATT TACCTTTTTT ATACCGAGCT AGCTGGACGT
TCCGGTGCAC CAACAACGGC AGATATCGTC GTTGCTGTCA TCGGTATGGT TCTCCTTTTA
GAGGCAACAC GCCGAGCGCT CGGTCCACCA CTGATGGTGG TTGCTGCTGT CTTCCTTATT
TACACCTTTG CTGGCCCTTA TATGCCCGAT GTCATCGCGC ATAAAGGAGC GAGCTTAAAC
AAGGCCATGT CTCACTTATG GCTAACAACG GAAGGTGTAT TCGGTGTCGC ATTAGGCGTT
TCAACCTCTT TTGTGTTCTT GTTTGTATTG TTTGGTGCCA TGCTGGAACG CGCTGGCGCA
GGTGCTTACT TCATTAAAGT CGCCTTTTCT TTGCTGGGTC ATATGAAAGG TGGTCCTGCA
AAAGCGGCCG TTGTTGCATC TGGTTTATCC GGGCTTGTTT CTGGCTCTTC AATCGCAAAC
GTGGTAACCA CTGGTACCTT TACCATTCCA TTGATGAAAC GTGTCGGTTT TCCGGGCACC
AAAGCGGGAG CCGTTGAAGT TGCCGCCTCA ACCAATGGTC AGTTAACGCC ACCAATCATG
GGCGCGGCGG CATTCTTGAT GGTGGAATAT GTCGGTATCT CATACGTTGA GGTGATTAAG
GCTGCTCTAC TTCCGGCACT TATCTCTTAC ATCGCTTTGA TTTACATCGT TCACCTTGAG
GCGTGTAAAG CGGGTATGAC AGGTCTTCCT CGTCGCCACA ACCCAACGTT AGTACAAAGT
TTGCTTTCCT TTACTGGCAC AATCTTAGGA CTGTGTGTGA TCAGCGCATT GGTTTACTAC
GGAGTGGGTT GGACGAAAGA TGTCTTTGGT GATGCCGCGA CGCCAATTGT TACGGTTGCC
CTGTTAATTG CGTATGTTGG CTTGGTGAAG ATCTCAGCAA ATCACGTGCA AGATGGCGCA
ATTGAGATTG ATGCAGAGTT AACAGAAGTA CCAGATCCTG GCCCAACGGT TAAATCTGGT
TTGCACTATC TACTGCCTAT CGTTGTATTG GTTTGGTGTC TGACTGTAGA GCGCTTCTCG
CCAGGTCTTT CAGCATTCTG GGCAACGGTG TTCATGATTT TCATTTTGCT GACTCAGCGT
CCATTGATTG CTCTGTTATC AAAGCAAGGT GACATGATGC AGCAAACCAA AGATGGCTTC
GTCGATCTGG CTGAGAGCTT GGTTGCTGGC GCTCGCAATA TGATTGGTAT CGGCGTTGCA
ACGGCAGCGG CAGGTACCGT AGTTGGGGTC GTCACCCTAA CGGGTATCGG CCTGGTCATG
ACGGACTTCG TTGAGTTTAT CTCTGGCGGT AGCATCATTC TTATGCTGCT GTTTACTGCA
ATAATCAGCT TGGTTCTTGG GATGGGTCTC CCGACAACGG CGAACTACAT CGTCGTCTCT
ACGTTGATGG CACCGGTTAT TGTCACACTA GGTGCAGCAC ATGGCTTGAT CATCCCACTC
ATTGCGGTGC ACTTGTTCGT TTTCTACTTT GGTATTTTGG CCGACGACAC CCCACCCGTA
GGTCTTGCGG CATTTGCGGC GGCTGCGATT GCTAAATCAG ACCCAATTCG TACAGGTATC
CAAGGCTTTA CTTACGATAT TCGAACCGCC ATTTTGCCAT TCATGTTTGT GTTCAATACC
CAGCTACTGT TGATGGGGAT AGACTCTTGG TGGCATTTAG CACTCACTGT CATCTCATCG
ATCATTGCGA TGCTGATCTT CTCCGCCGCA ACACAAGGAT GGTGGTTCAC GCGTAACAAG
TGGTGGGAAA CCGTTCTATT ATTAGTACTG ACATTTTCGT TTTTCCGTCC TGGTTTTTGG
TGGGACATGC TGTATCCAGC GAAAGTTCTT TCTCCTGGCG TTGAGGTAGC TCAAATCACG
GAAACGCTAA ATGTAGGAGA ATCATTGGAG CTACGTGTTG CCGGCGAAAA CCTTGAGGGC
GACTACATCG AGAAAACGGT TCGTCTTCCA TTCGAAGACA GTGCAACAAC AGCGGAAGCA
CGTATTTCGT CTATGGGTCT GATGCTGACC GAAAGCGACA ACAAAATGAT TGTCGATATG
GTCGAGTTTG GTAGCCCGGC AGAGTCTGCA GGTATCGACT TTGATTGGGA GATCAAGTGG
GTTATCCAAG ATGCAGAACG TCCGATGAAA GAATGGGTAT TTGTGCCATG CTTAATGATT
TTGCTGGTGC TTGCCATGAA CCAAAAACGT CGTGCTCGTA AGGAACAATT GAGCGCATAA
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| Protein sequence | MATNQAPSQD VQEMVAQADT GARSPSGMQG RILWFVPLCW SLFQLWYASP LPFIFNFGVL
NDTEARSIHL TFAIFLAFTA YPAMKNSPRD HIPLVDWILA LAGSFSAAYI YLFYTELAGR
SGAPTTADIV VAVIGMVLLL EATRRALGPP LMVVAAVFLI YTFAGPYMPD VIAHKGASLN
KAMSHLWLTT EGVFGVALGV STSFVFLFVL FGAMLERAGA GAYFIKVAFS LLGHMKGGPA
KAAVVASGLS GLVSGSSIAN VVTTGTFTIP LMKRVGFPGT KAGAVEVAAS TNGQLTPPIM
GAAAFLMVEY VGISYVEVIK AALLPALISY IALIYIVHLE ACKAGMTGLP RRHNPTLVQS
LLSFTGTILG LCVISALVYY GVGWTKDVFG DAATPIVTVA LLIAYVGLVK ISANHVQDGA
IEIDAELTEV PDPGPTVKSG LHYLLPIVVL VWCLTVERFS PGLSAFWATV FMIFILLTQR
PLIALLSKQG DMMQQTKDGF VDLAESLVAG ARNMIGIGVA TAAAGTVVGV VTLTGIGLVM
TDFVEFISGG SIILMLLFTA IISLVLGMGL PTTANYIVVS TLMAPVIVTL GAAHGLIIPL
IAVHLFVFYF GILADDTPPV GLAAFAAAAI AKSDPIRTGI QGFTYDIRTA ILPFMFVFNT
QLLLMGIDSW WHLALTVISS IIAMLIFSAA TQGWWFTRNK WWETVLLLVL TFSFFRPGFW
WDMLYPAKVL SPGVEVAQIT ETLNVGESLE LRVAGENLEG DYIEKTVRLP FEDSATTAEA
RISSMGLMLT ESDNKMIVDM VEFGSPAESA GIDFDWEIKW VIQDAERPMK EWVFVPCLMI
LLVLAMNQKR RARKEQLSA
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