| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001676 |
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| Symbol | |
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| ID | 8555305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 73206 |
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| End bp | 74141 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646404669 |
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| Product | malate dehydrogenase |
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| Protein accession | YP_003284304 |
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| Protein GI | 262392450 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0039] Malate/lactate dehydrogenases |
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| TIGRFAM ID | [TIGR01772] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000765273 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAG CCGTTATTGG TGCCGCTGGT GGCATCGGTC AAGCCCTGGC CCTTCTACTT
AAGAACCGTC TTCCTGCTGG TTCTGATTTA GCCCTATACG ATATTGCTCC AGTAACTCCT
GGTGTGGCTG CTGATCTTAG CCACATCCCG ACGCCAGTTT CTATCAAAGG TTACGCGGGT
GAAGATCCTA CTCCAGCACT AGAAGGTGCG GATGTTGTGC TGATTTCTGC AGGTGTTGCT
CGTAAACCTG GTATGGATCG CGCGGATCTA TTCAATGTAA ACGCTGGTAT CGTTAAGTCG
CTAGCGGAGA AGATTGCGGT TGTTTGTCCG AAAGCTTGTG TTGGTATCAT CACAAACCCG
GTAAATACAA CAGTGCCAAT TGCCGCTGAA GTACTTAAGA AAGCGGGTGT TTACGATAAG
CGTCGCTTGT TCGGTGTAAC AACACTTGAC GTTATCCGTT CAGAAACATT CGTTGCAGAG
CTAAAAGACA AAGATCCAGG TGACATTCGC GTACCTGTTA TCGGTGGTCA CTCTGGCGTA
ACGATCTTAC CTCTACTGTC TCAAGTGGAA GGCGTTGAGT TTACAGCTGA AGAAGTAGAA
GCATTAACGA AACGTATTCA AAACGCAGGT ACTGAAGTTG TAGAAGCGAA AGCGGGTGGT
GGTAGTGCAA CACTATCAAT GGGCCAAGCT GCATGTCGCT TTGGTCTGTC TCTAGTTCGT
GCTCTTCAAG GTGAAGAAGG CGTAGTTGAA TGTGCATACG TTGAAGGCGA CGGTGAGCAC
GCGACTTACT TCGCACAGCC TGTGAAACTA GGTAAAGAAG GCGTAGAAGA AGTACTAAGC
TACGGCAAAC TCAGCGACTA CGAAAAGTCT GCACTAGACG GTATGCTAGA AACACTAAAT
GGCGACATCA ACATTGGTGT TGAATTCGCA AAGTAA
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| Protein sequence | MKVAVIGAAG GIGQALALLL KNRLPAGSDL ALYDIAPVTP GVAADLSHIP TPVSIKGYAG
EDPTPALEGA DVVLISAGVA RKPGMDRADL FNVNAGIVKS LAEKIAVVCP KACVGIITNP
VNTTVPIAAE VLKKAGVYDK RRLFGVTTLD VIRSETFVAE LKDKDPGDIR VPVIGGHSGV
TILPLLSQVE GVEFTAEEVE ALTKRIQNAG TEVVEAKAGG GSATLSMGQA ACRFGLSLVR
ALQGEEGVVE CAYVEGDGEH ATYFAQPVKL GKEGVEEVLS YGKLSDYEKS ALDGMLETLN
GDINIGVEFA K
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