Gene VEA_001659 details

Gene Information

• Locus tag: VEA_001659
• ID: 8555288
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 57680
• End bp: 58282
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 646404652
• Product: 3-isopropylmalate dehydratase small subunit
• Protein accession: YP_003284287
• Protein GI: 262392433
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR00171] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.57325
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGGCT TTAAACAACA TACAGGCTTA GTTGTTCCTC TAGATGCAGC GAACGTTGAT 
ACTGATGCCA TCATTCCAAA ACAGTTCCTA CAAAAGGTGT CTCGCCTAGG CTTTGGTAAA 
CACTTGTTCC ATGACTGGCG CTTCCTAGAT GATGCTGGCG AACAGCCAAA TCCAGAGTTC 
GTGATGAACG CCCCACGCTA CCAAGGCGCT TCCATCTTGC TGGCTCGTGA AAACTTCGGT 
TGTGGCTCAT CCCGCGAACA CGCACCGTGG GCACTGGCGG ATTACGGCAT AAAAGCGATG 
ATCGCACCTA GCTTTGCCGA TATTTTTTAC GGCAACTCGA TCAACAACCA AATGGTGCCA 
GTTCGTTTGA CTGAGCAAGA AGTGGATGAG ATCTTCCAGT TTGTTGAGGC AAATGAAGGC 
GCAGAAGTCG AGGTCGATTT AGAAGCGAAT GTGGTTCGCG CCAACGGCAA AGAATATGGT 
TTTGAAATCG ATTCGTTCCG TCGTCACTGC TTACTAAACG GTTTGGACAA CATTGGCCTA 
ACCCTTCAGC ACGAAGATAA GATTGCTGAG TACGAAGCGA ATATCCCAAG CTTCTTGCGT 
TAA 

 

Protein sequence

MSGFKQHTGL VVPLDAANVD TDAIIPKQFL QKVSRLGFGK HLFHDWRFLD DAGEQPNPEF 
VMNAPRYQGA SILLARENFG CGSSREHAPW ALADYGIKAM IAPSFADIFY GNSINNQMVP 
VRLTEQEVDE IFQFVEANEG AEVEVDLEAN VVRANGKEYG FEIDSFRRHC LLNGLDNIGL 
TLQHEDKIAE YEANIPSFLR