Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001650 |
Symbol | |
ID | 8555279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 46758 |
End bp | 48566 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646404643 |
Product | long-chain-fatty-acid--CoA ligase |
Protein accession | YP_003284278 |
Protein GI | 262392424 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAGT TAGATTTTCA TATCGTTAAA CGTATTCGTG AACAAATTGC GAACGGTGGT ACACGCGTTG CACTCAAGCA TAAAGTGGAT GAGGAATGGC AAGGTATTAC GTGGACGCAA TTTGGTCAGC AAGTTGATGC TTTATCACTT GCACTTTTGG CTCAGGGATT AGGAGTCCAA GATAAAATCG GCATTTTCTC GAACAACATG CCGCAATGGA CGATTGCTGA TATTGCAGCG CTACAACTAC GCGGCGTAAC AGTACCTATT TACCCAACCA ATACCGCCGC TCAGTCGGCG TACATCATTG ACAACGCAGA CGTTAAAGTG CTGTTTGTTG GTGAGCAGCC ACAATTTGAC GCAGCAGTGA GCATTTTCGA CCAGTGCGAG CAGTTAGAGC TCATTGTTGC CATGTCTGAT GATATCGAAC TTGGCGAGCA TGATTTCGTT ATCTCTTGGC AAGCATTTGT CGCCAAAGGC GATACCACAT ACCAAGTTGA ATTGGACGCA CGTTTAGAGC AAGCAAAGGA AGATGATCTA CTCACGTTGA TCTACACCTC GGGCACAACA GGACAACCAA AGGGTGTCAT GTTGGACTAC GCAAACATTG CGGCGCAATT GGAAGGGCAC GATCAACGTT TGAGCCTTTC TCAAAGTGAT GTGTCACTGT GTTTCCTTCC GTTGTCACAC GTATTTGAAC GCGCTTGGAC CTTTTATGTG TTGTACAAAG GAGCGACCAA CTGCTATTTG CAAGACACCA TGCAGGTACG TGATGCACTG AGCCAAGTAC GACCTACCGT GATGTGTGCC GTACCGCGTT TCTATGAGAA GATCTTCTCT GCGATTCATG AGAAAGTGTC TCGCGCACCG ATTCACCGTA AGATTATGTT TACTTGGGCT GTGAACATGG GCGCAAAAAT GGCCGCTTGT CATCAAGAAA AACGTCAGCC ATCGCTCATG CTGCGCAAGT CATATGCATT GGCGGATAAA TTGGTTCTGA GCAAGCTGCG TGCGTTACTT GGTGGACAAA TCAACTTTAT GCCGTGTGGC GGTGCGAAGT TAGATGAAAC CATAGGCCGA TTCTTCCACG CGATTGGTAT CAATGTGAAG TTAGGTTACG GCATGACTGA AACCACGGCG ACAGTATCGT GTTGGGATGA TAAGTGCTTT AACCCAGACT CTATTGGTAT GTCGATGCCT GGCGCGCAAG TGAAGATCGG TGAGAACAAC GAGATTCTGG TGCGTGGTCC AATGGTGATG CGTGGCTATT ACAAAATGCC AGAAGAGACC GAAAAGACCT TTGATGAGCA CGGTTTCCTA AAAACTGGCG ATGCGGGTTA CATTGATGAA AATGGCAATT TGTTCATTAC TGATCGTATC AAAGAATTGA TGAAAACCTC TGGCGGTAAA TACATCGCTC CGCAAATGAT TGAAGGTGCG ATTGGTAAAG ACCACTTCAT CGAGCAAATC GCGGTTATCG CGGACACGCG TAAGTTTGTC TCGGCGCTGA TTGTGCCGTG TTTTGATTCT CTTGAAGAGT ATGCGAAAGA GCTGAATATC AAGTATCACG ATCGCGTTGA ATTGATTAAG CATCACCAAG TGGTCGAAAT GCTTGAGAAG CGTGTTAACG ATCTCCAAAA AGAGTTGGCA AAGTTTGAAC AGGTGAAGAA GTTTAAACTG TTACCAAGAG CTTTCTCTAT GGATGATGGT GAGTTAACGC CAACTCAAAA ACTGCGTCGT AAAGTCATCA ATGACAAATA CCAAGATGAA ATTGAAGAAA TGTATAAGGA AAAGTCAGAG AAAAAGTAA
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Protein sequence | MAKLDFHIVK RIREQIANGG TRVALKHKVD EEWQGITWTQ FGQQVDALSL ALLAQGLGVQ DKIGIFSNNM PQWTIADIAA LQLRGVTVPI YPTNTAAQSA YIIDNADVKV LFVGEQPQFD AAVSIFDQCE QLELIVAMSD DIELGEHDFV ISWQAFVAKG DTTYQVELDA RLEQAKEDDL LTLIYTSGTT GQPKGVMLDY ANIAAQLEGH DQRLSLSQSD VSLCFLPLSH VFERAWTFYV LYKGATNCYL QDTMQVRDAL SQVRPTVMCA VPRFYEKIFS AIHEKVSRAP IHRKIMFTWA VNMGAKMAAC HQEKRQPSLM LRKSYALADK LVLSKLRALL GGQINFMPCG GAKLDETIGR FFHAIGINVK LGYGMTETTA TVSCWDDKCF NPDSIGMSMP GAQVKIGENN EILVRGPMVM RGYYKMPEET EKTFDEHGFL KTGDAGYIDE NGNLFITDRI KELMKTSGGK YIAPQMIEGA IGKDHFIEQI AVIADTRKFV SALIVPCFDS LEEYAKELNI KYHDRVELIK HHQVVEMLEK RVNDLQKELA KFEQVKKFKL LPRAFSMDDG ELTPTQKLRR KVINDKYQDE IEEMYKEKSE KK
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