Gene VEA_001644 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001644 
Symbol 
ID8555273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp38582 
End bp39343 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content45% 
IMG OID646404637 
Producttranscriptional regulator of GlmS, DeoR family 
Protein accessionYP_003284272 
Protein GI262392418 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1349] Transcriptional regulators of sugar metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00296274 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAAC GAAACACTCA ACTAAGAAGA CACGCCATTT CTAACTTGGT TTCTGAGCTA 
GGAGAAGTCA GCGTTGACGA ACTCGCTCAG AAATTCGAAA CCTCAGAGGT CACGATTAGA
AAGGATTTAG CTTCTTTAGA GAAAAATGGC CAACTTCTAC GCCGCTACGG CGGTGCGATT
GCTATCCCAA CCGAAGTCAT TCACGAAGAA TTGAGCGCTA ATGTTTCGAC TCGAAAGCTA
AACTTGGCAA AAGCAGCGGC ATCACTGATT CGAGACCATA ATCGCATCGT GATCGACAGT
GGCAGTACGA CGGCTGCGTT GATTCAACAG TTGAATGACA AACGTGGCTT AGTTGTCATG
ACCAACTCGT TGCATGTTGC TAACGCCCTT AATGAATTAG AGAGCGAACC AACACTGCTG
ATGACTGGTG GGACTTGGGA TACGCACTCA GAATCTTTTC AAGGCAAAGT AGCCGAATCT
GTATTACGAG CTTACGATTT TGACCAGCTA TTTATCGGTG CGGATGGCAT CGATCTCGAA
CGCGGCACCA CAACATTTAA TGAATTGGTT GGTTTGAGTA AGGTGATGGC GGAAGTGTCG
CGCGAAGTGA TCGTCATGAT CGAATCGGAA AAAATCGGTC GTAAGATCCC GAATTTAGAG
CTCGCTTGGC ATCAAATTGA TGTGCTAGTG ACGGATGCTG ATATTCAGCA AGAACACAAA
ATACAGATTG AACAACATGG CGTGAAAGTT ATTTGTGCCT AA
 
Protein sequence
MSKRNTQLRR HAISNLVSEL GEVSVDELAQ KFETSEVTIR KDLASLEKNG QLLRRYGGAI 
AIPTEVIHEE LSANVSTRKL NLAKAAASLI RDHNRIVIDS GSTTAALIQQ LNDKRGLVVM
TNSLHVANAL NELESEPTLL MTGGTWDTHS ESFQGKVAES VLRAYDFDQL FIGADGIDLE
RGTTTFNELV GLSKVMAEVS REVIVMIESE KIGRKIPNLE LAWHQIDVLV TDADIQQEHK
IQIEQHGVKV ICA