Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001644 |
Symbol | |
ID | 8555273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 38582 |
End bp | 39343 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646404637 |
Product | transcriptional regulator of GlmS, DeoR family |
Protein accession | YP_003284272 |
Protein GI | 262392418 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00296274 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGAAAC GAAACACTCA ACTAAGAAGA CACGCCATTT CTAACTTGGT TTCTGAGCTA GGAGAAGTCA GCGTTGACGA ACTCGCTCAG AAATTCGAAA CCTCAGAGGT CACGATTAGA AAGGATTTAG CTTCTTTAGA GAAAAATGGC CAACTTCTAC GCCGCTACGG CGGTGCGATT GCTATCCCAA CCGAAGTCAT TCACGAAGAA TTGAGCGCTA ATGTTTCGAC TCGAAAGCTA AACTTGGCAA AAGCAGCGGC ATCACTGATT CGAGACCATA ATCGCATCGT GATCGACAGT GGCAGTACGA CGGCTGCGTT GATTCAACAG TTGAATGACA AACGTGGCTT AGTTGTCATG ACCAACTCGT TGCATGTTGC TAACGCCCTT AATGAATTAG AGAGCGAACC AACACTGCTG ATGACTGGTG GGACTTGGGA TACGCACTCA GAATCTTTTC AAGGCAAAGT AGCCGAATCT GTATTACGAG CTTACGATTT TGACCAGCTA TTTATCGGTG CGGATGGCAT CGATCTCGAA CGCGGCACCA CAACATTTAA TGAATTGGTT GGTTTGAGTA AGGTGATGGC GGAAGTGTCG CGCGAAGTGA TCGTCATGAT CGAATCGGAA AAAATCGGTC GTAAGATCCC GAATTTAGAG CTCGCTTGGC ATCAAATTGA TGTGCTAGTG ACGGATGCTG ATATTCAGCA AGAACACAAA ATACAGATTG AACAACATGG CGTGAAAGTT ATTTGTGCCT AA
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Protein sequence | MSKRNTQLRR HAISNLVSEL GEVSVDELAQ KFETSEVTIR KDLASLEKNG QLLRRYGGAI AIPTEVIHEE LSANVSTRKL NLAKAAASLI RDHNRIVIDS GSTTAALIQQ LNDKRGLVVM TNSLHVANAL NELESEPTLL MTGGTWDTHS ESFQGKVAES VLRAYDFDQL FIGADGIDLE RGTTTFNELV GLSKVMAEVS REVIVMIESE KIGRKIPNLE LAWHQIDVLV TDADIQQEHK IQIEQHGVKV ICA
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