Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001641 |
Symbol | |
ID | 8555270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 35258 |
End bp | 35950 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646404634 |
Product | putative two component response regulator transcription regulator protein |
Protein accession | YP_003284269 |
Protein GI | 262392415 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.170142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAATAT TGATCGTCGA AGATGAGCAC AAAGCCGGAG AATATCTGCA AAAAGGTTTG ATTGAATCTG GGTATGTGGT GGATTTAGTA CATGATGGGG TCGATGGGCT GTATCACGCT ACCAGTGAAG AATATGACTT AATCCTCCTC GACATTATGT TGCCTAAACT CGATGGTTGG CAGGTGCTTA ATACATTGCG CAGTAGTGGG ATTCACACCC CAGTGATCAT GCTGACAGCG AAGGAGCAAG TGGAAGATCG CGTGCGCGGT TTTGAGCTGG GTGCCAATGA CTATGTCGTA AAACCTTACG CGTTTGCGGA GCTACTGGCG CGTATTCAAA ACGTATTTCG TCATCATATT TCCGCGCAAG TGGTCGCATC GCCGCAAACA TTACGTGTGG CAGATTTAGA ACTTGATATG ATCAAACGCG TTGCCACGCG CGCGGGGCAG TCGATGTCGC TTACCGCCAA AGAATATGCC CTGCTTGAGT TGTTGATGCG CAAAACTGGC CAAGTGCTTT CACGTACCAC TATTGCGTCG TTAGTGTGGG ATATGAACTT TGACAGCGAT ACCAATGTGA TTGATGTGGC GGTCAAACGT CTGCGTAGCA AAGTGGACAA ACCGTTCGAT AAACCACTGA TTCACACTGT CAGAGGGATG GGCTACAAAC TCGAAGAGAG TTGTGATGCC TAA
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Protein sequence | MKILIVEDEH KAGEYLQKGL IESGYVVDLV HDGVDGLYHA TSEEYDLILL DIMLPKLDGW QVLNTLRSSG IHTPVIMLTA KEQVEDRVRG FELGANDYVV KPYAFAELLA RIQNVFRHHI SAQVVASPQT LRVADLELDM IKRVATRAGQ SMSLTAKEYA LLELLMRKTG QVLSRTTIAS LVWDMNFDSD TNVIDVAVKR LRSKVDKPFD KPLIHTVRGM GYKLEESCDA
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