Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001623 |
Symbol | |
ID | 8555251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 11936 |
End bp | 13702 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646404615 |
Product | DNA primase |
Protein accession | YP_003284251 |
Protein GI | 262392397 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00199304 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGAC ACATCCCTCG CAGTTTTATC GATGACCTTC TAGCTCGACT TGATATTGTC GATATCATCG ACGCACGTGT GAAACTTAAG AAAAAAGGCA AAAACTACGG CGCATGCTGC CCGTTCCACA ACGAAAAGAC GCCGTCATTC AGCGTCAGTC AAGAAAAACA GTTCTACCAT TGTTTTGGTT GTGGTGCGCA CGGAAATGCC ATCGACTTCT TGATGGAATT CGACCGGCTA GAATTCGTCG AAGCCATTGA AGAACTCGCT TCATACTTGG GCTTAGATGT TCCTCGCGAA CAACGTAGCG GCGGTAATGG TTCGTTCCAG TCAGGCCCAC AAGCAAGCAG CAGTGAAAAA CGTAATCTAT ACGACTTAAT GGGCAGCATT GCTCAATTTT ATCGTAACCA ACTCAAGCAG CCAGCAAGTA AAGTGGCGAT TGAGTATCTA AAAGATCGCG GCCTGTCTGG TGAAATCGTC CAGAAATTTG GCATCGGCTA TGTGGCTGAT GAATGGGATT TAGTTCGTAA GAACTTTGGC CAGAATAAAG AAAACCAAGA CATGCTCGTC ACAGGCGGCA TGTTGATTGA AAACGATAAA GGCAACCGCT ACGACCGATT CCGTGGTCGA GTGATGTTTC CTATTCGAGA CAGACGCGGC CGAGTGATAG GCTTTGGTGG TCGAGTATTA GGTGATGGGA CACCAAAATA TCTCAACTCA CCCGAAACCC CGATATTTCA TAAAGGTAAA GAGTTGTATG GCCTTTATGA AGTACTACAA GCGTATCGTG AGCCACCACA AATTTTAGTG GTTGAAGGCT ATATGGATGT TGTCGCGCTT GCTCAATATG GCGTAGATTA TTCCGTTGCC TCATTGGGAA CCTCGACAAC GGGCGATCAC TTGCAAGTGT TATTCAGGCA AACAAGCACC GTCGTATGTT GTTACGACGG TGACCGCGCA GGCCGTGAAG CCGCGTGGCG TGCCATGGAA AATGCATTGC CTTACCTAAC TGATGGTCGC CAGTTAAAAT TCATGTTTTT GCCGGATGGA GAAGATCCCG ACTCTTACAT CCGACAAAAC GGAAAACAAG CATTTGAACA ACAAGTGTCT AATGCGATGC CCTTGTCTGA ATTCATGTTC AGCTTATTGA CTCAGCAAGT CGATATGAGC ACGAAAGAAG GCATGGCAAA GCTGAGTACC CTTGCTGTTC CTCTCATCGA CAAAGTCCCT GGCGGCACTT TAAGACTATA CTTGAGAGAA CTGCTTGGCC GCCGTTTGGG TTTGGTTGAT GAACGCCAAC TACAGCAGCT AATTTCAAAA CAAGGTAAAG AGGATAAAAG GCCTCAACCT CATAAAGAAA TCAAGCGAAC GCCGATGCGA GAAGTGATCG CGTTACTGAT TCAAAACCCA CAATACGTAA GTATGGTGCC AGATCTAACT AGCGTTAGAG ATTTGCCCAT TCCTGGTCTA AGTTTATTTG TTGATGTACT TGATAAATGC CAAGCGCATC CCCATATCAA CACAGGCCAA TTATTAGAGC ATTGGCGAAA CAGCCAAAAT GAGACCCTTC TGTCTCGTCT CGCGAGTTGG GACATTCCAC TCGATGAGGA CAACCAAGAA GAAATATTTT TAGACTCACT GGATAAAATT ATTGCCCAGT GCGTAGAAAA ACAAATTGAA AACCTGCAGG CCAAAGCAAG AAGTGTCGGT TTATCAGCCG AAGAGAAAAG GGAGCTGCTA GCACTTATGC TAGATTTAAA AGCGTAA
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Protein sequence | MAGHIPRSFI DDLLARLDIV DIIDARVKLK KKGKNYGACC PFHNEKTPSF SVSQEKQFYH CFGCGAHGNA IDFLMEFDRL EFVEAIEELA SYLGLDVPRE QRSGGNGSFQ SGPQASSSEK RNLYDLMGSI AQFYRNQLKQ PASKVAIEYL KDRGLSGEIV QKFGIGYVAD EWDLVRKNFG QNKENQDMLV TGGMLIENDK GNRYDRFRGR VMFPIRDRRG RVIGFGGRVL GDGTPKYLNS PETPIFHKGK ELYGLYEVLQ AYREPPQILV VEGYMDVVAL AQYGVDYSVA SLGTSTTGDH LQVLFRQTST VVCCYDGDRA GREAAWRAME NALPYLTDGR QLKFMFLPDG EDPDSYIRQN GKQAFEQQVS NAMPLSEFMF SLLTQQVDMS TKEGMAKLST LAVPLIDKVP GGTLRLYLRE LLGRRLGLVD ERQLQQLISK QGKEDKRPQP HKEIKRTPMR EVIALLIQNP QYVSMVPDLT SVRDLPIPGL SLFVDVLDKC QAHPHINTGQ LLEHWRNSQN ETLLSRLASW DIPLDEDNQE EIFLDSLDKI IAQCVEKQIE NLQAKARSVG LSAEEKRELL ALMLDLKA
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