Gene VEA_001616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001616 
Symbol 
ID8555244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp7123 
End bp7611 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content44% 
IMG OID646404608 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_003284244 
Protein GI262392390 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.194869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCA CCTATATCGG TGTTGGTACG AATGTAGAAA GAGAGCAACA TGCGCTCGCT 
GCATATCAGG AGCTGCTACA GCTTGGAGAA AGTCTCCTCG TATCGCCGGT ATATGAATGT 
GAACCTATTG GCTTTAGCAG CCAGAACTTC TACAACTTTG TCGTTGCAAT GCGTACCGAG 
TTGTCATTAG AAGAGTTGAG TCATCAGCTA CGTGAGATTG AATTTAAGTG GGGACGCGAA 
GAAAATGCGC AAAAGTATCA GGATCGAACA CTGGATCTCG ATATAGTGTT GTTCGGTGAA 
TGCGTCTCCA AGAAAAAACC TGAGCTACCT CGCAGTGATA TCTACAAATA TCCTTTTGTC 
ACAAAGCCTC TGTATGATCT CGAACCTCAA TTAGTGATCC CAGGCGATGG ACGCACAGTC 
GCAGATATTT GGCATGCAAT GCAGCCAGTC GATTCACTCA AACCTGTTTC TTTTTCATTT 
TTAATTTGA
 
Protein sequence
MITTYIGVGT NVEREQHALA AYQELLQLGE SLLVSPVYEC EPIGFSSQNF YNFVVAMRTE 
LSLEELSHQL REIEFKWGRE ENAQKYQDRT LDLDIVLFGE CVSKKKPELP RSDIYKYPFV 
TKPLYDLEPQ LVIPGDGRTV ADIWHAMQPV DSLKPVSFSF LI