| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001615 |
|---|
| Symbol | |
|---|
| ID | 8555243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 6310 |
|---|
| End bp | 7113 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646404607 |
|---|
| Product | undecaprenyl-diphosphatase |
|---|
| Protein accession | YP_003284243 |
|---|
| Protein GI | 262392389 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.754191 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTATT TTGAAGCCTT TATTCTGGCT CTGATTCAGG GTCTGACAGA GTTTTTGCCT
ATTTCGAGCT CTGCCCATTT GATCCTGCCC TCCGCCATTT TGGGATGGGA AGACCAAGGT
CTAGCTTTTG ATGTTGCTGT TCACGTCGGT ACATTAATGG CGGTAGTGAT CTATTTTCGC
CATGAAGTGA TCACTCTGTT CCAGGCATTA TTTGCTTCGA TCTTTAAAGG AGATAGGAGT
AAAGAAGCAA AACTTGCTTG GATGATCGTG ATCGCCACGA TTCCAGCTTG TGTGTTTGGC
TTGTTGATGA AAGACATCAT TGAAGTGTAT CTACGTAGCG CTTATGTCAT CGCGACCACA
ACGATCGTAT TTGGTTTGTT GCTTTGGTGG GTAGACAAAA ACGCTAAGTT GGTTGCGGAT
GAATACCAAA CGGGTTGGAA GAAAGCCGTG TTTATCGGTA TTGCCCAAGC CTTAGCGATG
ATTCCTGGAA CGTCGCGTTC AGGGGCGACC ATTACGGCTG CACTTTACCT AGGCTTTACT
CGAGAAGCGG CTGCGCGCTT TTCATTTTTA ATGTCGATCC CGATCATTAC ATTAGCAGGT
AGCTACTTAG GCATGAAGCT AGTGACCAGT GGTGAACCTG TCCATATTGG TTTCTTGCTG
ACTGGTATCA TCACATCGTT TATCAGTGCG TACATCTGTA TCCACTTCTT CTTAAAGATG
ATTTCACGCA TGGGCATGAC ACCGTTTGTG ATTTACCGTC TGATTCTAGG TTTCGGCTTG
TTTGCGTTCT TGCTTAGCGC ATGA
|
|---|
| Protein sequence | MSYFEAFILA LIQGLTEFLP ISSSAHLILP SAILGWEDQG LAFDVAVHVG TLMAVVIYFR
HEVITLFQAL FASIFKGDRS KEAKLAWMIV IATIPACVFG LLMKDIIEVY LRSAYVIATT
TIVFGLLLWW VDKNAKLVAD EYQTGWKKAV FIGIAQALAM IPGTSRSGAT ITAALYLGFT
REAAARFSFL MSIPIITLAG SYLGMKLVTS GEPVHIGFLL TGIITSFISA YICIHFFLKM
ISRMGMTPFV IYRLILGFGL FAFLLSA
|
|---|
| |