Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001607 |
Symbol | |
ID | 8559920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | + |
Start bp | 1824969 |
End bp | 1826318 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646409275 |
Product | nitrate ABC transporter nitrate-binding protein |
Protein accession | YP_003288753 |
Protein GI | 262396900 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGAAAG TGTCAGCAAT TTCGTTATCG GTATTCACCA CGGTCAGCGT AAAGGCAGAG TTGGGTGAGC CAGAAATTGA AGACCTGAAG TTTGGTTTTA TTAAGTTAAC CGATATGGCA CCGCTGGCGG TTGCTTATGA GAAAGGCTTT TTTGAAGACG AAGGCTTGTA CGTCACTTTA GAAGCGCAAG CAAACTGGAA GGTGCTTTTA GACCGAGTCA TCGATGGTGA GCTTGCTGGC GCGCACATGC TTGCTGGTCA GCCATTGGGC GCAACGATTG GTGTCGGCAC AAAAGCAGAA GTGATTACCG CGTTCAGTAT GGATTTGAAC GGCAACGCAA TTACGGTTTC CAATGACACT TGGGAGCAGA TGAAGCAGTA CATTCCAAAG CAACCAGATG GCAAACCAGT TCACCCAATC AAAGCGGATG CACTTAAGCC TGTGGTCGAC AGCTATCTGG ATAAAGGCAA ACCGTTCAAC ATGGGCATGG TGTTCCCTGT ATCGACACAC AACTATGAGT TGCGTTACTG GTTAGCGGCA GGCGGGATTC ATCCAGGCTT TTACGCACCA GACTCAGGCG ATAACAGTGG CCAGTTGGAC GCTGACGTTC TTTTGAGTGT TACACCGCCA CCACAAATGC CAGCAACAAT GGAAGCGGGC ACGATCAAAG GGTACTGCGT AGGCGAACCA TGGAACCAAC AAGCCGTATT CAAAGGCATT GGCACACCAG TCGTGACCGA TTACGAGATC TGGAAGAACA ACCCAGAGAA AGTGTTTGGT GTTTCCAAAG CTTGGGCTGA GAAGTATCCA AACACACACA TTCGCGTAGT GAAAGCCTTG ATTCGAGCGG CACATTGGTT GGATGAAAAT GACAATGCCA ACCGCCAAGA AGCAGTGAAG ATGCTATCAA AAAGCGAATA CGTTGGAGCC GATGCCGAAG TTATCGCCAA CTCAATGACC GGCACGTTTG AATACGAGAA AGGCGACAAA CGAGACGTGC CAGATTTCAA CGTGTTCTTC CGTCATAACG CCACGTATCC GTATTACAGC GATGCGATTT GGTACCTGAC CCAAATGCGT CGATGGGGGC AGATCTCAAG CGAGAAATCC GATGATTGGT ACATGGATGT CGCAAAAGAG GTTTACCGTC CAGATATCTA CCAACAAGCG GCTCAAGCAC TAATTGAAGA TGGTGTGTTG AGCAAAAAAG ACTTCCCAGA TTTCAGTGCT GAAGATGGTT TCCGTGCGCC ACAAACACAC TTTATCGACA ACATCGTTTA TGACGGTCGC GAGCCAAATA AATATCTAGA GAAGTTCTCT ATCGGGCTTA AAGGAAAAGA CAAGGTTTAA
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Protein sequence | MLKVSAISLS VFTTVSVKAE LGEPEIEDLK FGFIKLTDMA PLAVAYEKGF FEDEGLYVTL EAQANWKVLL DRVIDGELAG AHMLAGQPLG ATIGVGTKAE VITAFSMDLN GNAITVSNDT WEQMKQYIPK QPDGKPVHPI KADALKPVVD SYLDKGKPFN MGMVFPVSTH NYELRYWLAA GGIHPGFYAP DSGDNSGQLD ADVLLSVTPP PQMPATMEAG TIKGYCVGEP WNQQAVFKGI GTPVVTDYEI WKNNPEKVFG VSKAWAEKYP NTHIRVVKAL IRAAHWLDEN DNANRQEAVK MLSKSEYVGA DAEVIANSMT GTFEYEKGDK RDVPDFNVFF RHNATYPYYS DAIWYLTQMR RWGQISSEKS DDWYMDVAKE VYRPDIYQQA AQALIEDGVL SKKDFPDFSA EDGFRAPQTH FIDNIVYDGR EPNKYLEKFS IGLKGKDKV
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